RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 UBE2Q2LH0YL09 131 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 WNT10BO00744 389 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 ALDH1A1P00352 501 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 HPS5Q9UPZ3 1129 aa11.65□□□□□ -0.54
CPSF4-211ENST00000471455 TBC1D12O60347 775 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 TM4SF4P48230 202 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
CPSF4-211ENST00000471455 TTLL5Q6EMB2 1281 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 ZNF296Q8WUU4 475 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-211ENST00000471455 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 SPEF2Q9C093 1822 aa11.64□□□□□ -0.55
CPSF4-211ENST00000471455 H7C1W4 665 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 GPR25O00155 361 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 DPYSL4O14531 572 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 MYO1BO43795 1136 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 EVI5O60447 810 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 SASH1O94885 1247 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 TBC1D8O95759 1140 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 ITGA6P23229 1130 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 CWF19L2Q2TBE0 894 aaKnown RBP11.63□□□□□ -0.55
CPSF4-211ENST00000471455 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
CPSF4-211ENST00000471455 FBXO46Q6PJ61 603 aaPredicted RBP11.63□□□□□ -0.55
CPSF4-211ENST00000471455 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 CFHR5Q9BXR6 569 aa11.63□□□□□ -0.55
CPSF4-211ENST00000471455 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 FKTNO75072 461 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 INHBEP58166 350 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 GCKRQ14397 625 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 DLGAP5Q15398 846 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 PRAMEF18Q5VWM3 479 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
CPSF4-211ENST00000471455 IL16Q14005 1332 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 MANSC4A6NHS7 340 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-211ENST00000471455 UNCXA6NJT0 531 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-211ENST00000471455 GTF2IP78347 998 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 FLIIQ13045 1269 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-211ENST00000471455 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 ZNF804AQ7Z570 1209 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 LINS1Q8NG48 757 aa11.61□□□□□ -0.55
CPSF4-211ENST00000471455 TSR2Q969E8 191 aaKnown RBP11.61□□□□□ -0.55
CPSF4-211ENST00000471455 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
CPSF4-211ENST00000471455 SCAF8Q9UPN6 1271 aaKnown RBP11.61□□□□□ -0.55
CPSF4-211ENST00000471455 ZBTB48P10074 688 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-211ENST00000471455 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
CPSF4-211ENST00000471455 CHRNDQ07001 517 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
CPSF4-211ENST00000471455 SUPT20HL1Q3ZLR7 823 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 OTUD7BQ6GQQ9 843 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 DEFB129Q9H1M3 183 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 CD209Q9NNX6 404 aa11.6□□□□□ -0.55
CPSF4-211ENST00000471455 ZNF646O15015 1829 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-211ENST00000471455 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
CPSF4-211ENST00000471455 CSF1RP07333 972 aa11.59□□□□□ -0.55
CPSF4-211ENST00000471455 FKBP1AP62942 108 aaKnown RBP11.59□□□□□ -0.55
CPSF4-211ENST00000471455 PRKG1Q13976 671 aa11.59□□□□□ -0.55
CPSF4-211ENST00000471455 MAP3K11Q16584 847 aa11.59□□□□□ -0.55
CPSF4-211ENST00000471455 C15orf52Q6ZUT6 534 aaKnown RBP11.59□□□□□ -0.55
CPSF4-211ENST00000471455 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
CPSF4-211ENST00000471455 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
CPSF4-211ENST00000471455 ZBED3Q96IU2 234 aaPredicted RBP11.59□□□□□ -0.55
CPSF4-211ENST00000471455 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
CPSF4-211ENST00000471455 KLRK1P26718 216 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
CPSF4-211ENST00000471455 FOSBP53539 338 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 TNFAIP1Q13829 316 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 E2F4Q16254 413 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 INTS3Q68E01 1043 aaKnown RBP11.58□□□□□ -0.56
CPSF4-211ENST00000471455 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 GCC1Q96CN9 775 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
CPSF4-211ENST00000471455 CASP7P55210 303 aa11.57□□□□□ -0.56
CPSF4-211ENST00000471455 G2E3Q7L622 706 aa11.57□□□□□ -0.56
CPSF4-211ENST00000471455 ERO1AQ96HE7 468 aa11.57□□□□□ -0.56
CPSF4-211ENST00000471455 WNK4Q96J92 1243 aa11.57□□□□□ -0.56
CPSF4-211ENST00000471455 ARIH1Q9Y4X5 557 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-211ENST00000471455 ECM29Q5VYK3 1845 aa11.57□□□□□ -0.56
CPSF4-211ENST00000471455 IL1R1P14778 569 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 RBM5P52756 815 aaKnown RBP eCLIP11.56□□□□□ -0.563e-9■□□□□ 10.6
CPSF4-211ENST00000471455 CCDC57Q2TAC2 916 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 SPNS2Q8IVW8 549 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 VEZTQ9HBM0 779 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 TRIM17Q9Y577 477 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 FANCIQ9NVI1 1328 aa11.56□□□□□ -0.56
CPSF4-211ENST00000471455 F8W031 263 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms