RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FERD3LQ96RJ6 166 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 POP1Q99575 1024 aaKnown RBP9.55□□□□□ -0.88
SMC5-202ENST00000471372 MIR1-1HGQ9H1L0 117 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
SMC5-202ENST00000471372 hCG_2014768A0A024R1R8 64 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 RAB11FIP3O75154 756 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 LMNB1P20700 586 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 GPLD1P80108 840 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 PTSQ03393 145 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 CCDC84Q86UT8 332 aaPredicted RBP9.54□□□□□ -0.88
SMC5-202ENST00000471372 LILRB2Q8N423 598 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 DNAJC7Q99615 494 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
SMC5-202ENST00000471372 SLC35F4A4IF30 521 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 CHMP4BP1P59074 171 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 IGBP1P78318 339 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 MPP2Q14168 576 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
SMC5-202ENST00000471372 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 RNF187Q5TA31 235 aaPredicted RBP9.53□□□□□ -0.88
SMC5-202ENST00000471372 GK5Q6ZS86 529 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 STK35Q8TDR2 534 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 ACTR10Q9NZ32 417 aa9.53□□□□□ -0.88
SMC5-202ENST00000471372 H7C1W4 665 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 CILPO75339 1184 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 PPP2R3AQ06190 1150 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 DDR2Q16832 855 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 ADAMTSL4Q6UY14 1074 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 FILIP1Q7Z7B0 1213 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 CRBNQ96SW2 442 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 CCDC113Q9H0I3 377 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 CLEC4MQ9H2X3 399 aaPredicted RBP9.52□□□□□ -0.89
SMC5-202ENST00000471372 FANCLQ9NW38 375 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 IFT57Q9NWB7 429 aa9.52□□□□□ -0.89
SMC5-202ENST00000471372 ZNF165P49910 485 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 CLCQ05315 142 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 REC114Q7Z4M0 266 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 TRIM22Q8IYM9 498 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 GRIN3AQ8TCU5 1115 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 TNKS2Q9H2K2 1166 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 CWC22Q9HCG8 908 aaKnown RBP9.51□□□□□ -0.89
SMC5-202ENST00000471372 ZNRF3Q9ULT6 936 aa9.51□□□□□ -0.89
SMC5-202ENST00000471372 TRIM37O94972 964 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 GHRHP01286 108 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 IBSPP21815 317 aaPredicted RBP9.5□□□□□ -0.89
SMC5-202ENST00000471372 NME2P22392 152 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 CEP135Q66GS9 1140 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 SULF2Q8IWU5 870 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 MICAL1Q8TDZ2 1067 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 BSNDQ8WZ55 320 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 GAL3ST3Q96A11 431 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 DNAJB12Q9NXW2 375 aaKnown RBP9.5□□□□□ -0.89
SMC5-202ENST00000471372 CYP8B1Q9UNU6 501 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 MAPK8IP1Q9UQF2 711 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 SAMM50Q9Y512 469 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 COL4A3BPQ9Y5P4 624 aa9.5□□□□□ -0.89
SMC5-202ENST00000471372 ESYT3A0FGR9 886 aa9.49□□□□□ -0.89
SMC5-202ENST00000471372 CDC45O75419 566 aa9.49□□□□□ -0.89
SMC5-202ENST00000471372 B3GALT4O96024 378 aa9.49□□□□□ -0.89
SMC5-202ENST00000471372 EIF2AK2P19525 551 aaKnown RBP9.49□□□□□ -0.89
SMC5-202ENST00000471372 TBC1D8BQ0IIM8 1120 aa9.49□□□□□ -0.89
SMC5-202ENST00000471372 CCDC155Q8N6L0 562 aa9.49□□□□□ -0.89
SMC5-202ENST00000471372 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
SMC5-202ENST00000471372 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
SMC5-202ENST00000471372 ATXN7L1Q9ULK2 861 aaPredicted RBP9.49□□□□□ -0.89
SMC5-202ENST00000471372 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
SMC5-202ENST00000471372 PDPK1O15530 556 aa9.48□□□□□ -0.89
SMC5-202ENST00000471372 PTPN11Q06124 597 aaPredicted RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 IFRD2Q12894 506 aaPredicted RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 NEUROD1Q13562 356 aa9.48□□□□□ -0.89
SMC5-202ENST00000471372 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 VN1R5Q7Z5H4 357 aa9.48□□□□□ -0.89
SMC5-202ENST00000471372 LSRQ86X29 649 aaPredicted RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 REXO1Q8N1G1 1221 aaKnown RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
SMC5-202ENST00000471372 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 BRINP2Q9C0B6 783 aa9.48□□□□□ -0.89
SMC5-202ENST00000471372 UBE2OQ9C0C9 1292 aaKnown RBP9.48□□□□□ -0.89
SMC5-202ENST00000471372 CBX8Q9HC52 389 aa9.48□□□□□ -0.89
SMC5-202ENST00000471372 SMNDC1O75940 238 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMC5-202ENST00000471372 BPNT1O95861 308 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 FGFR3P22607 806 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 ANAPC15P60006 121 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 FAM182BQ5T319 152 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 LLGL2Q6P1M3 1020 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 MPRIPQ6WCQ1 1025 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 ZCRB1Q8TBF4 217 aaKnown RBP9.47□□□□□ -0.89
SMC5-202ENST00000471372 APPBP2Q92624 585 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 PCDH12Q9NPG4 1184 aa9.47□□□□□ -0.89
SMC5-202ENST00000471372 NXF1Q9UBU9 619 aaKnown RBP9.47□□□□□ -0.89
SMC5-202ENST00000471372 SOX13Q9UN79 622 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms