RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 BCAMP50895 628 aa20.96■□□□□ 0.95
HSPG2-208ENST00000471322 GTF2IP78347 998 aa20.96■□□□□ 0.95
HSPG2-208ENST00000471322 C15orf52Q6ZUT6 534 aaKnown RBP20.96■□□□□ 0.95
HSPG2-208ENST00000471322 USP17L1Q7RTZ2 530 aa20.96■□□□□ 0.95
HSPG2-208ENST00000471322 VPS37DQ86XT2 251 aa20.96■□□□□ 0.95
HSPG2-208ENST00000471322 FAM227BQ96M60 508 aa20.96■□□□□ 0.95
HSPG2-208ENST00000471322 ANTXR1Q9H6X2 564 aa20.96■□□□□ 0.95
HSPG2-208ENST00000471322 GOLIM4O00461 696 aa20.95■□□□□ 0.94
HSPG2-208ENST00000471322 VIL1P09327 827 aaKnown RBP20.95■□□□□ 0.94
HSPG2-208ENST00000471322 ADORA1P30542 326 aa20.95■□□□□ 0.94
HSPG2-208ENST00000471322 HIBADHP31937 336 aaKnown RBP20.95■□□□□ 0.94
HSPG2-208ENST00000471322 EPHX2P34913 555 aa20.95■□□□□ 0.94
HSPG2-208ENST00000471322 TTLL5Q6EMB2 1281 aa20.95■□□□□ 0.94
HSPG2-208ENST00000471322 EDC3Q96F86 508 aaKnown RBP20.95■□□□□ 0.94
HSPG2-208ENST00000471322 GPRC5DQ9NZD1 345 aa20.95■□□□□ 0.94
HSPG2-208ENST00000471322 CCDC171Q6TFL3 1326 aa20.94■□□□□ 0.94
HSPG2-208ENST00000471322 A0A0D9SFI3 127 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 UQCRFS1P1P0C7P4 283 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 SLC5A1P13866 664 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 MCMDC2Q4G0Z9 681 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 CAVIN4Q5BKX8 364 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 RSBN1LQ6PCB5 846 aaPredicted RBP20.93■□□□□ 0.94
HSPG2-208ENST00000471322 MICALL2Q8IY33 904 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 MAP4K1Q92918 833 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 SLKQ9H2G2 1235 aaPredicted RBP20.93■□□□□ 0.94
HSPG2-208ENST00000471322 HELLSQ9NRZ9 838 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 CNOT7Q9UIV1 285 aaKnown RBP20.93■□□□□ 0.94
HSPG2-208ENST00000471322 PALD1Q9ULE6 856 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 TOMM70O94826 608 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 HSP90AA1P07900 732 aaKnown RBP20.93■□□□□ 0.94
HSPG2-208ENST00000471322 IL1R1P14778 569 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 NEK4P51957 841 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 DACT2Q5SW24 774 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 KCNB2Q92953 911 aa20.93■□□□□ 0.94
HSPG2-208ENST00000471322 FRAT2O75474 233 aaPredicted RBP20.92■□□□□ 0.94
HSPG2-208ENST00000471322 CD2BP2O95400 341 aaKnown RBP20.92■□□□□ 0.94
HSPG2-208ENST00000471322 ZFYP08048 801 aaPredicted RBP20.92■□□□□ 0.94
HSPG2-208ENST00000471322 FBXO33Q7Z6M2 555 aa20.92■□□□□ 0.94
HSPG2-208ENST00000471322 CHMP5Q9NZZ3 219 aa20.92■□□□□ 0.94
HSPG2-208ENST00000471322 ZKSCAN1P17029 563 aaPredicted RBP20.91■□□□□ 0.94
HSPG2-208ENST00000471322 PTH1RQ03431 593 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 RBM26Q5T8P6 1007 aaKnown RBP20.91■□□□□ 0.94
HSPG2-208ENST00000471322 STRIP1Q5VSL9 837 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 RNF20Q5VTR2 975 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 SAMD7Q7Z3H4 446 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 CLEC11AQ9Y240 323 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 NDUFB9Q9Y6M9 179 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 SCN4AP35499 1836 aa20.91■□□□□ 0.94
HSPG2-208ENST00000471322 EGFRP00533 1210 aa20.9■□□□□ 0.94
HSPG2-208ENST00000471322 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-208ENST00000471322 NECTIN1Q15223 517 aa20.9■□□□□ 0.94
HSPG2-208ENST00000471322 TTF1Q15361 905 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-208ENST00000471322 TDRD7Q8NHU6 1098 aaKnown RBP20.9■□□□□ 0.94
HSPG2-208ENST00000471322 CIZ1Q9ULV3 898 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-208ENST00000471322 SNX14Q9Y5W7 946 aa20.9■□□□□ 0.94
HSPG2-208ENST00000471322 RNF113AO15541 343 aaKnown RBP20.89■□□□□ 0.94
HSPG2-208ENST00000471322 TBC1D10BQ4KMP7 808 aaPredicted RBP20.89■□□□□ 0.94
HSPG2-208ENST00000471322 TRPM4Q8TD43 1214 aa20.89■□□□□ 0.94
HSPG2-208ENST00000471322 DPF2Q92785 391 aa20.89■□□□□ 0.94
HSPG2-208ENST00000471322 RBM8AQ9Y5S9 174 aaKnown RBP20.89■□□□□ 0.94
HSPG2-208ENST00000471322 H7C1D1 291 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 RPS12P25398 132 aaKnown RBP20.89■□□□□ 0.93
HSPG2-208ENST00000471322 ARID4AP29374 1257 aaPredicted RBP20.89■□□□□ 0.93
HSPG2-208ENST00000471322 C1QTNF8P60827 252 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 ZMYM1Q5SVZ6 1142 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 KIAA0825Q8IV33 1275 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 CERS5Q8N5B7 392 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 SPRYD3Q8NCJ5 442 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 TM6SF1Q9BZW5 370 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 ADARB2Q9NS39 739 aaKnown RBP20.89■□□□□ 0.93
HSPG2-208ENST00000471322 HMG20BQ9P0W2 317 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 PCNTO95613 3336 aa20.89■□□□□ 0.93
HSPG2-208ENST00000471322 F8W031 263 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-208ENST00000471322 PHKA1P46020 1223 aa20.88■□□□□ 0.93
HSPG2-208ENST00000471322 CCDC102BQ68D86 513 aa20.88■□□□□ 0.93
HSPG2-208ENST00000471322 ZSCAN25Q6NSZ9 544 aa20.88■□□□□ 0.93
HSPG2-208ENST00000471322 GMLQ99445 158 aa20.88■□□□□ 0.93
HSPG2-208ENST00000471322 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.88■□□□□ 0.932e-13■■■■□ 20.4
HSPG2-208ENST00000471322 HIRAP54198 1017 aaPredicted RBP20.87■□□□□ 0.93
HSPG2-208ENST00000471322 PNMA8AQ86V59 439 aaPredicted RBP20.87■□□□□ 0.93
HSPG2-208ENST00000471322 AGBL3Q8NEM8 1001 aa20.87■□□□□ 0.93
HSPG2-208ENST00000471322 U3KPZ7 1027 aaPredicted RBP20.87■□□□□ 0.93
HSPG2-208ENST00000471322 USP17L8P0C7I0 530 aa20.86■□□□□ 0.93
HSPG2-208ENST00000471322 ZAP70P43403 619 aa20.86■□□□□ 0.93
HSPG2-208ENST00000471322 CREB3L3Q68CJ9 461 aa20.86■□□□□ 0.93
HSPG2-208ENST00000471322 ZNF589Q86UQ0 364 aaPredicted RBP20.86■□□□□ 0.93
HSPG2-208ENST00000471322 RBM46Q8TBY0 533 aaKnown RBP20.86■□□□□ 0.93
HSPG2-208ENST00000471322 PSME4Q14997 1843 aa20.86■□□□□ 0.93
HSPG2-208ENST00000471322 PSMA5P28066 241 aa20.86■□□□□ 0.93
HSPG2-208ENST00000471322 MAP1SQ66K74 1059 aaPredicted RBP20.86■□□□□ 0.93
HSPG2-208ENST00000471322 RASEFQ8IZ41 740 aa20.86■□□□□ 0.93
HSPG2-208ENST00000471322 DDIT3P35638 169 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 MCAMP43121 646 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 SCARF1Q14162 830 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 TSGA10IPQ3SY00 556 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 MFSD14BQ5SR56 506 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 USP50Q70EL3 339 aaPredicted RBP20.85■□□□□ 0.93
HSPG2-208ENST00000471322 LDHDQ86WU2 507 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 SMC1BQ8NDV3 1235 aa20.85■□□□□ 0.93
HSPG2-208ENST00000471322 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms