RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PRXQ9BXM0 1461 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 LDHCP07864 332 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 PLCB4Q15147 1175 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 C4orf50Q6ZRC1 276 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 ARHGAP24Q8N264 748 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 CSRNP2Q9H175 543 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 BACH1O14867 736 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 RNF8O76064 485 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 ZNF365Q70YC5 407 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 VPS8Q8N3P4 1428 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC26Q8TAB7 109 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 POMGNT1Q8WZA1 660 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 PLIN2Q99541 437 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 NBPF7P0C2Y1 421 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 SLC12A2P55011 1212 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 MAP3K7CLP57077 242 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 RRS1Q15050 365 aaKnown RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 DBN1Q16643 649 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 CFAP70Q5T0N1 1121 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 IFIT1BQ5T764 474 aaKnown RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 AFAP1L1Q8TED9 768 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 NAP1L4Q99733 375 aaKnown RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 CRNKL1Q9BZJ0 848 aaKnown RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 ARHGAP42A6NI28 874 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 GSTO1P78417 241 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 MUM1Q2TAK8 710 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.71□□□□□ -1.17
BRCA1-210ENST00000471181 MPRIPQ6WCQ1 1025 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 PNMA8AQ86V59 439 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-210ENST00000471181 PDS5BQ9NTI5 1447 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 WTAPQ15007 396 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 RBM26Q5T8P6 1007 aaKnown RBP7.71□□□□□ -1.17
BRCA1-210ENST00000471181 BSPRYQ5W0U4 402 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 NCOA7Q8NI08 942 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 TRIM31Q9BZY9 425 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 USTQ9Y2C2 406 aa7.71□□□□□ -1.17
BRCA1-210ENST00000471181 BAG2O95816 211 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 STX17P56962 302 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 WHAMMP3Q1A5X7 153 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 TNPO1Q92973 898 aaKnown RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 BACH2Q9BYV9 841 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 VEZTQ9HBM0 779 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 IRAK4Q9NWZ3 460 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 WWC3Q9ULE0 1092 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 RAP1GDS1P52306 607 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 TAOK1Q7L7X3 1001 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 KIFAP3Q92845 792 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 TRIM56Q9BRZ2 755 aaKnown RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 HDAC9Q9UKV0 1011 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 GNAT3A8MTJ3 354 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 MARCKSP29966 332 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 UTP14CQ5TAP6 766 aaKnown RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 RPAP2Q8IXW5 612 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 MGARPQ8TDB4 240 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 FNBP1Q96RU3 617 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 TSGA10Q9BZW7 698 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 BAG5Q9UL15 447 aa7.71□□□□□ -1.18
BRCA1-210ENST00000471181 UTP11Q9Y3A2 253 aaKnown RBP7.71□□□□□ -1.18
BRCA1-210ENST00000471181 B4DLN1 442 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 MRPL12P52815 198 aaKnown RBP7.7□□□□□ -1.18
BRCA1-210ENST00000471181 B4GALNT4Q76KP1 1039 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 ANO3Q9BYT9 981 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SPDYE3A6NKU9 549 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 APOEP02649 317 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 HMGB2P26583 209 aaKnown RBP7.7□□□□□ -1.18
BRCA1-210ENST00000471181 ZBTB17Q13105 803 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 CCDC93Q567U6 631 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 HP1BP3Q5SSJ5 553 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-210ENST00000471181 HDXQ7Z353 690 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 NUB1Q9Y5A7 615 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 HCLS1P14317 486 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-210ENST00000471181 INPP5BP32019 993 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 HS2ST1Q7LGA3 356 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SKA2Q8WVK7 121 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-210ENST00000471181 CDK19Q9BWU1 502 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 TNFAIP3P21580 790 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 POLD1P28340 1107 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 BLVRAP53004 296 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 ST5P78524 1137 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SPAG1Q07617 926 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 LIN9Q5TKA1 542 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 CCDC186Q7Z3E2 898 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SKAP1Q86WV1 359 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SDCCAG3Q96C92 435 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 ALG1Q9BT22 464 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 ANKRD30BQ9BXX2 1392 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 KLF18A0A0U1RQI7 1052 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 FAM170AA1A519 330 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SPDYE2BA6NHP3 402 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 SPDYE6P0CI01 402 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms