RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 ALDH1A1P00352 501 aa17.05■□□□□ 0.32
ABCA4-204ENST00000470771 FGFR2P21802 821 aa17.05■□□□□ 0.32
ABCA4-204ENST00000470771 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
ABCA4-204ENST00000470771 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
ABCA4-204ENST00000470771 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
ABCA4-204ENST00000470771 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
ABCA4-204ENST00000470771 TMOD2Q9NZR1 351 aa17.05■□□□□ 0.32
ABCA4-204ENST00000470771 PCDHAC2Q9Y5I4 1007 aa17.05■□□□□ 0.32
ABCA4-204ENST00000470771 MANSC4A6NHS7 340 aaPredicted RBP17.04■□□□□ 0.32
ABCA4-204ENST00000470771 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
ABCA4-204ENST00000470771 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
ABCA4-204ENST00000470771 SPRYD7Q5W111 196 aa17.04■□□□□ 0.32
ABCA4-204ENST00000470771 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
ABCA4-204ENST00000470771 SIL1Q9H173 461 aa17.04■□□□□ 0.32
ABCA4-204ENST00000470771 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
ABCA4-204ENST00000470771 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
ABCA4-204ENST00000470771 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
ABCA4-204ENST00000470771 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
ABCA4-204ENST00000470771 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
ABCA4-204ENST00000470771 ANKRD13AQ8IZ07 590 aa17.03■□□□□ 0.32
ABCA4-204ENST00000470771 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
ABCA4-204ENST00000470771 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
ABCA4-204ENST00000470771 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
ABCA4-204ENST00000470771 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
ABCA4-204ENST00000470771 A0A1B0GUL6 1792 aa17.02■□□□□ 0.32
ABCA4-204ENST00000470771 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
ABCA4-204ENST00000470771 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
ABCA4-204ENST00000470771 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.31
ABCA4-204ENST00000470771 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.31
ABCA4-204ENST00000470771 TCP10L2B9ZVM9 353 aa17.01■□□□□ 0.31
ABCA4-204ENST00000470771 SEMA3EO15041 775 aa17.01■□□□□ 0.31
ABCA4-204ENST00000470771 USP2O75604 605 aaPredicted RBP17.01■□□□□ 0.31
ABCA4-204ENST00000470771 TBC1D8O95759 1140 aa17.01■□□□□ 0.31
ABCA4-204ENST00000470771 FKBP1CQ5VVH2 108 aa17.01■□□□□ 0.31
ABCA4-204ENST00000470771 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
ABCA4-204ENST00000470771 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
ABCA4-204ENST00000470771 SRGAP3O43295 1099 aa17■□□□□ 0.31
ABCA4-204ENST00000470771 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
ABCA4-204ENST00000470771 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
ABCA4-204ENST00000470771 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
ABCA4-204ENST00000470771 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
ABCA4-204ENST00000470771 CTU1Q7Z7A3 348 aaKnown RBP17■□□□□ 0.31
ABCA4-204ENST00000470771 MEIS3Q99687 375 aa17■□□□□ 0.31
ABCA4-204ENST00000470771 AKAP2Q9Y2D5 859 aa17■□□□□ 0.31
ABCA4-204ENST00000470771 GNAI2P04899 355 aa16.99■□□□□ 0.31
ABCA4-204ENST00000470771 FAM83AQ86UY5 434 aa16.99■□□□□ 0.31
ABCA4-204ENST00000470771 ZGPATQ8N5A5 531 aaKnown RBP16.99■□□□□ 0.31
ABCA4-204ENST00000470771 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
ABCA4-204ENST00000470771 FZD1Q9UP38 647 aa16.99■□□□□ 0.31
ABCA4-204ENST00000470771 LDHBP07195 334 aaKnown RBP16.98■□□□□ 0.31
ABCA4-204ENST00000470771 MAP3K9P80192 1104 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 GRIK5Q16478 980 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 MIER1Q8N108 512 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 WNK4Q96J92 1243 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 CLMNQ96JQ2 1002 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 CFHR5Q9BXR6 569 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 CSADQ9Y600 493 aa16.98■□□□□ 0.31
ABCA4-204ENST00000470771 AOX1Q06278 1338 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 GPR25O00155 361 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 BCAR3O75815 825 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 TRIM27P14373 513 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 APOBEC3HQ6NTF7 200 aaKnown RBP16.97■□□□□ 0.31
ABCA4-204ENST00000470771 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 ZNF296Q8WUU4 475 aaPredicted RBP16.97■□□□□ 0.31
ABCA4-204ENST00000470771 TEPSINQ96N21 525 aa16.97■□□□□ 0.31
ABCA4-204ENST00000470771 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
ABCA4-204ENST00000470771 FKTNO75072 461 aa16.96■□□□□ 0.31
ABCA4-204ENST00000470771 WDHD1O75717 1129 aaPredicted RBP16.96■□□□□ 0.31
ABCA4-204ENST00000470771 MTX1Q13505 466 aa16.96■□□□□ 0.31
ABCA4-204ENST00000470771 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
ABCA4-204ENST00000470771 SPTY2D1Q68D10 685 aaPredicted RBP16.96■□□□□ 0.31
ABCA4-204ENST00000470771 ECM29Q5VYK3 1845 aa16.96■□□□□ 0.3
ABCA4-204ENST00000470771 ZBTB22O15209 634 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 CACNB3P54284 484 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 MLLT1Q03111 559 aaPredicted RBP16.95■□□□□ 0.3
ABCA4-204ENST00000470771 G3BP1Q13283 466 aaKnown RBP eCLIP16.95■□□□□ 0.3
ABCA4-204ENST00000470771 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
ABCA4-204ENST00000470771 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 CLUAP1Q96AJ1 413 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 ELP3Q9H9T3 547 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 SALL1Q9NSC2 1324 aa16.95■□□□□ 0.3
ABCA4-204ENST00000470771 SSC5DA1L4H1 1573 aa16.94■□□□□ 0.3
ABCA4-204ENST00000470771 PHKA1P46020 1223 aa16.94■□□□□ 0.3
ABCA4-204ENST00000470771 RGS19P49795 217 aa16.94■□□□□ 0.3
ABCA4-204ENST00000470771 TIMM10P62072 90 aa16.94■□□□□ 0.3
ABCA4-204ENST00000470771 GTF2A2P52657 109 aa16.93■□□□□ 0.3
ABCA4-204ENST00000470771 TFCP2Q12800 502 aa16.93■□□□□ 0.3
ABCA4-204ENST00000470771 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
ABCA4-204ENST00000470771 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
ABCA4-204ENST00000470771 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
ABCA4-204ENST00000470771 A0A1B0GUL7 405 aa16.92■□□□□ 0.3
ABCA4-204ENST00000470771 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
ABCA4-204ENST00000470771 PRDX5P30044 214 aa16.92■□□□□ 0.3
ABCA4-204ENST00000470771 VGLL4Q14135 290 aa16.92■□□□□ 0.3
ABCA4-204ENST00000470771 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms