RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CUTAO60888 179 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 VSNL1P62760 191 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 CWF19L2Q2TBE0 894 aaKnown RBP10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 ZNF569Q5MCW4 686 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 BEND3Q5T5X7 828 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 LINC00301Q8NCQ3 95 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 ANKRD20A12PQ8NF67 263 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 CXorf56Q9H5V9 222 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 PFKFB2O60825 505 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 MAP2K2P36507 400 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 AKAP17AQ02040 695 aaKnown RBP10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 EFCAB13Q8IY85 973 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 SMARCC2Q8TAQ2 1214 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
NHLRC3-203ENST00000470258 KIF5CO60282 957 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 FCHSD1Q86WN1 690 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 SOWAHDA6NJG2 315 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 RNF40O75150 1001 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 ERLIN2O94905 339 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 SYKP43405 635 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 KCNG4Q8TDN1 519 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 EYA1Q99502 592 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 HSD3B7Q9H2F3 369 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 L1RE1Q9UN81 338 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 IKBKBO14920 756 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 PPFIA4O75335 1185 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 SASH1O94885 1247 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 CCDC175P0C221 793 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 FBXW10Q5XX13 1052 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 TMEM139Q8IV31 216 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 IL17REQ8NFR9 667 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 FAM71BQ8TC56 605 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 AFAP1L1Q8TED9 768 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 SMARCC1Q92922 1105 aaPredicted RBP10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 C8orf76Q96K31 380 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 LLPHQ9BRT6 129 aaKnown RBP10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 ALDH8A1Q9H2A2 487 aaPredicted RBP10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 RTEL1Q9NZ71 1219 aa10.92□□□□□ -0.66
NHLRC3-203ENST00000470258 A0A1W2PQ27 194 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 A0A1W2PQ64 194 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 A0A1W2PQD8 194 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 CCT5P48643 541 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 PLEKHO1Q53GL0 409 aaPredicted RBP10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 STOX1Q6ZVD7 989 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 DDX46Q7L014 1031 aaKnown RBP10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 CEP112Q8N8E3 955 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 RIN2Q8WYP3 895 aaPredicted RBP10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 CLGNO14967 610 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 MED23Q9ULK4 1368 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 NRXN3Q9Y4C0 1643 aa10.91□□□□□ -0.66
NHLRC3-203ENST00000470258 A0A087WUV0 522 aaPredicted RBP10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 LRRIQ3A6PVS8 624 aaPredicted RBP10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 POTEB2H3BUK9 544 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 STX10O60499 249 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 MMP14P50281 582 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 HSPA2P54652 639 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 AXDND1Q5T1B0 1012 aaPredicted RBP10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CDC23Q9UJX2 597 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 MAP3K2Q9Y2U5 619 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CEP83Q9Y592 693 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 U3KPZ7 1027 aaPredicted RBP10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 SETD1AO15047 1707 aaKnown RBP10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CTAGE15A4D2H0 777 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 ALDH1L1O75891 902 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CTAGE8P0CG41 777 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 DHX32Q7L7V1 743 aaKnown RBP10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CTAGE6Q86UF2 777 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CTAGE4Q8IX94 777 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 INTS13Q9NVM9 706 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.66
NHLRC3-203ENST00000470258 AIMP1Q12904 312 aaKnown RBP10.9□□□□□ -0.67
NHLRC3-203ENST00000470258 SPECC1LQ69YQ0 1117 aa10.9□□□□□ -0.67
NHLRC3-203ENST00000470258 USHBP1Q8N6Y0 703 aa10.9□□□□□ -0.67
NHLRC3-203ENST00000470258 TC2NQ8N9U0 490 aa10.9□□□□□ -0.67
NHLRC3-203ENST00000470258 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.67
NHLRC3-203ENST00000470258 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.67
NHLRC3-203ENST00000470258 MROH7-TTC4A0A0A0MT08 1334 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 CTAGE9A4FU28 777 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 RPS6KA5O75582 802 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 ZNF827Q17R98 1081 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 CLIC6Q96NY7 704 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 CDC5LQ99459 802 aaKnown RBP10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 GBP3Q9H0R5 595 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 NEDD4P46934 1319 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 H0YHG0 523 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 KAT2BQ92831 832 aa10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
NHLRC3-203ENST00000470258 CPLX1O14810 134 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms