RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 GCKRQ14397 625 aa11.66□□□□□ -0.54
CCDC171-204ENST00000470191 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
CCDC171-204ENST00000470191 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
CCDC171-204ENST00000470191 ZNF70Q9UC06 446 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-204ENST00000470191 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.54
CCDC171-204ENST00000470191 TESPA1A2RU30 521 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-204ENST00000470191 VGLL4Q14135 290 aa11.65□□□□□ -0.54
CCDC171-204ENST00000470191 ARHGEF6Q15052 776 aa11.65□□□□□ -0.54
CCDC171-204ENST00000470191 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-204ENST00000470191 DPF3Q92784 378 aa11.65□□□□□ -0.54
CCDC171-204ENST00000470191 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-204ENST00000470191 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
CCDC171-204ENST00000470191 AK9Q5TCS8 1911 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 UNCXA6NJT0 531 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 CSF1RP07333 972 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 IL1R1P14778 569 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 GTF2A2P52657 109 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 CASP7P55210 303 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
CCDC171-204ENST00000470191 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-204ENST00000470191 KIF22Q14807 665 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 TTF2Q9UNY4 1162 aaKnown RBP11.64□□□□□ -0.55
CCDC171-204ENST00000470191 CSADQ9Y600 493 aa11.64□□□□□ -0.55
CCDC171-204ENST00000470191 CACNB3P54284 484 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 MTFR1Q15390 333 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
CCDC171-204ENST00000470191 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 MFSD14BQ5SR56 506 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 BRCA2P51587 3418 aa11.63□□□□□ -0.55
CCDC171-204ENST00000470191 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-204ENST00000470191 GYG1P46976 350 aa11.62□□□□□ -0.55
CCDC171-204ENST00000470191 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
CCDC171-204ENST00000470191 FOXO4P98177 505 aa11.62□□□□□ -0.55
CCDC171-204ENST00000470191 FLIIQ13045 1269 aa11.62□□□□□ -0.55
CCDC171-204ENST00000470191 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
CCDC171-204ENST00000470191 DZIP1LQ8IYY4 767 aaKnown RBP11.62□□□□□ -0.55
CCDC171-204ENST00000470191 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
CCDC171-204ENST00000470191 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
CCDC171-204ENST00000470191 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
CCDC171-204ENST00000470191 IQSEC3Q9UPP2 1182 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-204ENST00000470191 MGAMO43451 1857 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 CRKP46108 304 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 TNNI2P48788 182 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-204ENST00000470191 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-204ENST00000470191 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 LDHAL6AQ6ZMR3 332 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 ZKSCAN4Q969J2 545 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-204ENST00000470191 BIN2Q9UBW5 565 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-204ENST00000470191 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
CCDC171-204ENST00000470191 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 F6X3S4 739 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 TLR2O60603 784 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 CETPP11597 493 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 GRIK5Q16478 980 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 CCDC57Q2TAC2 916 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC171-204ENST00000470191 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
CCDC171-204ENST00000470191 DLL1O00548 723 aa11.59□□□□□ -0.55
CCDC171-204ENST00000470191 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
CCDC171-204ENST00000470191 PSMC4P43686 418 aa11.59□□□□□ -0.55
CCDC171-204ENST00000470191 TDRD7Q8NHU6 1098 aaKnown RBP11.59□□□□□ -0.55
CCDC171-204ENST00000470191 TRIOBPQ9H2D6 2365 aa11.59□□□□□ -0.55
CCDC171-204ENST00000470191 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 IRF6O14896 467 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-204ENST00000470191 FMNL1O95466 1100 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-204ENST00000470191 CCL5P13501 91 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 CTGFP29279 349 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 SNAPC2Q13487 334 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 ERO1BQ86YB8 467 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-204ENST00000470191 RAET1EQ8TD07 263 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 TRIM47Q96LD4 638 aa11.58□□□□□ -0.56
CCDC171-204ENST00000470191 PUS3Q9BZE2 481 aaKnown RBP11.58□□□□□ -0.56
CCDC171-204ENST00000470191 CEP290O15078 2479 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 OSBPP22059 807 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 GRK4P32298 578 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-204ENST00000470191 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 SRRDQ9UH36 339 aa11.57□□□□□ -0.56
CCDC171-204ENST00000470191 MYPNQ86TC9 1320 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms