RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
LINC00173-201ENST00000470091 NBPF12Q5TAG4 269 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-201ENST00000470091 SPRYD7Q5W111 196 aa16.88■□□□□ 0.29
LINC00173-201ENST00000470091 CENPQQ7L2Z9 268 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-201ENST00000470091 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
LINC00173-201ENST00000470091 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-201ENST00000470091 R3HDMLQ9H3Y0 253 aa16.88■□□□□ 0.29
LINC00173-201ENST00000470091 ZNF646O15015 1829 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-201ENST00000470091 GPR25O00155 361 aa16.87■□□□□ 0.29
LINC00173-201ENST00000470091 PPP1R12BO60237 982 aaPredicted RBP16.87■□□□□ 0.29
LINC00173-201ENST00000470091 FKBP1AP62942 108 aaKnown RBP16.87■□□□□ 0.29
LINC00173-201ENST00000470091 SREBF2Q12772 1141 aa16.87■□□□□ 0.29
LINC00173-201ENST00000470091 SUPT20HL1Q3ZLR7 823 aa16.87■□□□□ 0.29
LINC00173-201ENST00000470091 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
LINC00173-201ENST00000470091 TDRD7Q8NHU6 1098 aaKnown RBP16.87■□□□□ 0.29
LINC00173-201ENST00000470091 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
LINC00173-201ENST00000470091 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
LINC00173-201ENST00000470091 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
LINC00173-201ENST00000470091 RASA3Q14644 834 aa16.86■□□□□ 0.29
LINC00173-201ENST00000470091 RIPOR2Q9Y4F9 1068 aa16.86■□□□□ 0.29
LINC00173-201ENST00000470091 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
LINC00173-201ENST00000470091 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
LINC00173-201ENST00000470091 LRRC24Q50LG9 513 aa16.85■□□□□ 0.29
LINC00173-201ENST00000470091 VPS37DQ86XT2 251 aa16.85■□□□□ 0.29
LINC00173-201ENST00000470091 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
LINC00173-201ENST00000470091 HPS5Q9UPZ3 1129 aa16.85■□□□□ 0.29
LINC00173-201ENST00000470091 FRAT2O75474 233 aaPredicted RBP16.84■□□□□ 0.29
LINC00173-201ENST00000470091 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
LINC00173-201ENST00000470091 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
LINC00173-201ENST00000470091 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
LINC00173-201ENST00000470091 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
LINC00173-201ENST00000470091 PPP2R3BQ9Y5P8 575 aa16.84■□□□□ 0.29
LINC00173-201ENST00000470091 MANSC4A6NHS7 340 aaPredicted RBP16.83■□□□□ 0.28
LINC00173-201ENST00000470091 FKTNO75072 461 aa16.83■□□□□ 0.28
LINC00173-201ENST00000470091 IREB2P48200 963 aaKnown RBP16.83■□□□□ 0.28
LINC00173-201ENST00000470091 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
LINC00173-201ENST00000470091 GRIK5Q16478 980 aa16.83■□□□□ 0.28
LINC00173-201ENST00000470091 MROH5Q6ZUA9 1318 aa16.83■□□□□ 0.28
LINC00173-201ENST00000470091 ANKRD44Q8N8A2 993 aa16.83■□□□□ 0.28
LINC00173-201ENST00000470091 WNK4Q96J92 1243 aa16.83■□□□□ 0.28
LINC00173-201ENST00000470091 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
LINC00173-201ENST00000470091 UTYO14607 1347 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 GNAI3P08754 354 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
LINC00173-201ENST00000470091 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 FBXO33Q7Z6M2 555 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 IFNL1Q8IU54 200 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
LINC00173-201ENST00000470091 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 CRKP46108 304 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 BCAMP50895 628 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 INHBEP58166 350 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
LINC00173-201ENST00000470091 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 PDE4DIPQ5VU43 2346 aa16.81■□□□□ 0.28
LINC00173-201ENST00000470091 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
LINC00173-201ENST00000470091 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00173-201ENST00000470091 PDE8BO95263 885 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 ALDH1A1P00352 501 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 GNAI2P04899 355 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
LINC00173-201ENST00000470091 GJA5P36382 358 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 CEP85Q6P2H3 762 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 ELP3Q9H9T3 547 aa16.8■□□□□ 0.28
LINC00173-201ENST00000470091 ZBTB48P10074 688 aaPredicted RBP16.79■□□□□ 0.28
LINC00173-201ENST00000470091 CACNB3P54284 484 aa16.79■□□□□ 0.28
LINC00173-201ENST00000470091 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
LINC00173-201ENST00000470091 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
LINC00173-201ENST00000470091 LRRFIP2Q9Y608 721 aaKnown RBP16.79■□□□□ 0.28
LINC00173-201ENST00000470091 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
LINC00173-201ENST00000470091 NOM1Q5C9Z4 860 aaKnown RBP16.78■□□□□ 0.28
LINC00173-201ENST00000470091 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
LINC00173-201ENST00000470091 CFHR5Q9BXR6 569 aa16.78■□□□□ 0.28
LINC00173-201ENST00000470091 UNCXA6NJT0 531 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 TNNI2P48788 182 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 TEPSINQ96N21 525 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 PTPN18Q99952 460 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
LINC00173-201ENST00000470091 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
LINC00173-201ENST00000470091 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
LINC00173-201ENST00000470091 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
LINC00173-201ENST00000470091 TBC1D22AQ8WUA7 517 aa16.76■□□□□ 0.27
LINC00173-201ENST00000470091 TEKT1Q969V4 418 aa16.76■□□□□ 0.27
LINC00173-201ENST00000470091 MAP3K9P80192 1104 aa16.75■□□□□ 0.27
LINC00173-201ENST00000470091 CRHR2Q13324 411 aa16.75■□□□□ 0.27
LINC00173-201ENST00000470091 PUM3Q15397 648 aaKnown RBP16.75■□□□□ 0.27
LINC00173-201ENST00000470091 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
LINC00173-201ENST00000470091 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
LINC00173-201ENST00000470091 EYA2O00167 538 aa16.74■□□□□ 0.27
LINC00173-201ENST00000470091 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms