RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 NXPE3Q969Y0 559 aa7.14□□□□□ -1.27
SOX2-OT-204ENST00000469278 RC3H2Q9HBD1 1191 aaKnown RBP7.14□□□□□ -1.27
SOX2-OT-204ENST00000469278 ACTL7BQ9Y614 415 aa7.14□□□□□ -1.27
SOX2-OT-204ENST00000469278 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 SPRED2Q7Z698 418 aa7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 ATCAYQ86WG3 371 aa7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 TMEM40Q8WWA1 233 aa7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 MISP3Q96FF7 219 aa7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 ZKSCAN3Q9BRR0 538 aa7.13□□□□□ -1.27
SOX2-OT-204ENST00000469278 ESRRAP11474 423 aaPredicted RBP7.12□□□□□ -1.27
SOX2-OT-204ENST00000469278 C8orf34Q49A92 452 aa7.12□□□□□ -1.27
SOX2-OT-204ENST00000469278 XKR5Q6UX68 686 aa7.12□□□□□ -1.27
SOX2-OT-204ENST00000469278 DYMQ7RTS9 669 aa7.12□□□□□ -1.27
SOX2-OT-204ENST00000469278 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
SOX2-OT-204ENST00000469278 SEMA6CQ9H3T2 930 aa7.12□□□□□ -1.27
SOX2-OT-204ENST00000469278 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.11□□□□□ -1.27
SOX2-OT-204ENST00000469278 CCER1Q8TC90 406 aaPredicted RBP7.11□□□□□ -1.27
SOX2-OT-204ENST00000469278 EDN3P14138 238 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 DNM1Q05193 864 aaKnown RBP7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 BNIP3Q12983 259 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 AKAP4Q5JQC9 854 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 HP1BP3Q5SSJ5 553 aaPredicted RBP7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 WFDC3Q8IUB2 231 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 GLIS3Q8NEA6 775 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 STK32AQ8WU08 396 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 EDEM1Q92611 657 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 AP4E1Q9UPM8 1137 aa7.1□□□□□ -1.27
SOX2-OT-204ENST00000469278 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 BHLHE41Q9C0J9 482 aaPredicted RBP7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 CHRDQ9H2X0 955 aa7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 ACSS3Q9H6R3 686 aa7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 RAD18Q9NS91 495 aa7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 FAM105AQ9NUU6 356 aa7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 DAGLAQ9Y4D2 1042 aa7.09□□□□□ -1.27
SOX2-OT-204ENST00000469278 A6NHS1 94 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 RNASE1P07998 156 aaKnown RBP7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 FUT4P22083 530 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 ASPAP45381 313 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 CYP27C1Q4G0S4 372 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 OGFOD3Q6PK18 319 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 PI4K2BQ8TCG2 481 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 FAM84AQ96KN4 292 aa7.08□□□□□ -1.28
SOX2-OT-204ENST00000469278 PHACTR2O75167 634 aa7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 ZNF865P0CJ78 1059 aaPredicted RBP7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 CD8BP10966 210 aa7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 MAOBP27338 520 aa7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 NETO1Q8TDF5 533 aa7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 GGNBP2Q9H3C7 697 aa7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 LGR6Q9HBX8 967 aa7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 MBNL3Q9NUK0 354 aaKnown RBP7.07□□□□□ -1.28
SOX2-OT-204ENST00000469278 LRRC10BA6NIK2 292 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 EREGO14944 169 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 PDGFAP04085 211 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 CYP11A1P05108 521 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 PLD6Q8N2A8 252 aaKnown RBP7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 LRRN4CLQ8ND94 238 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 TOX2Q96NM4 488 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 NRSN2Q9GZP1 204 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 ZFYVE1Q9HBF4 777 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 C1GALT1Q9NS00 363 aa7.06□□□□□ -1.28
SOX2-OT-204ENST00000469278 POU4F3Q15319 338 aa7.05□□□□□ -1.28
SOX2-OT-204ENST00000469278 BHLHE22Q8NFJ8 381 aaPredicted RBP7.05□□□□□ -1.28
SOX2-OT-204ENST00000469278 ADAMTS6Q9UKP5 1117 aa7.05□□□□□ -1.28
SOX2-OT-204ENST00000469278 DYNC1LI2O43237 492 aaPredicted RBP7.04□□□□□ -1.28
SOX2-OT-204ENST00000469278 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
SOX2-OT-204ENST00000469278 MZF1P28698 734 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 RAP1GAPP47736 663 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 MESP2Q0VG99 397 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 NOM1Q5C9Z4 860 aaKnown RBP7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 LILRA6Q6PI73 481 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 FAM181AQ8N9Y4 354 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 ZSCAN18Q8TBC5 510 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 SNX29Q8TEQ0 813 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 CORO1BQ9BR76 489 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 SEPT3Q9UH03 358 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 VAV3Q9UKW4 847 aa7.03□□□□□ -1.28
SOX2-OT-204ENST00000469278 METTL12A8MUP2 240 aa7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 CTSBP07858 339 aa7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 PRKCQQ04759 706 aa7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 CLEC4MQ9H2X3 399 aaPredicted RBP7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 LATS2Q9NRM7 1088 aa7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 FAM53CQ9NYF3 392 aa7.02□□□□□ -1.29
SOX2-OT-204ENST00000469278 TNFRSF21O75509 655 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 FAM87AP0C7U9 286 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 CD96P40200 585 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 MLANAQ16655 118 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 TMEM164Q5U3C3 297 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 DDX54Q8TDD1 881 aaKnown RBP7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 HELQQ8TDG4 1101 aa7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 CLP1Q92989 425 aaKnown RBP7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 GSX1Q9H4S2 264 aaPredicted RBP7.01□□□□□ -1.29
SOX2-OT-204ENST00000469278 NCANO14594 1321 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms