RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 ALPK3Q96L96 1907 aa14.39□□□□□ -0.11
NEDD9-207ENST00000468612 ADGRA2Q96PE1 1338 aa14.39□□□□□ -0.11
NEDD9-207ENST00000468612 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
NEDD9-207ENST00000468612 PCGF6Q9BYE7 350 aa14.38□□□□□ -0.11
NEDD9-207ENST00000468612 ANKRD2Q9GZV1 360 aa14.38□□□□□ -0.11
NEDD9-207ENST00000468612 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
NEDD9-207ENST00000468612 ZNF70Q9UC06 446 aaPredicted RBP14.38□□□□□ -0.11
NEDD9-207ENST00000468612 CPA4Q9UI42 421 aa14.38□□□□□ -0.11
NEDD9-207ENST00000468612 SNCAIPQ9Y6H5 919 aa14.38□□□□□ -0.11
NEDD9-207ENST00000468612 PRUNE2Q8WUY3 3088 aa14.38□□□□□ -0.11
NEDD9-207ENST00000468612 FMNL1O95466 1100 aaPredicted RBP14.37□□□□□ -0.11
NEDD9-207ENST00000468612 CAPN2P17655 700 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 IGHMBP2P38935 993 aaKnown RBP14.37□□□□□ -0.11
NEDD9-207ENST00000468612 BCAMP50895 628 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 SNAPC2Q13487 334 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 DUSP27Q5VZP5 1158 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 C15orf52Q6ZUT6 534 aaKnown RBP14.37□□□□□ -0.11
NEDD9-207ENST00000468612 ERO1BQ86YB8 467 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 SLAIN1Q8ND83 568 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
NEDD9-207ENST00000468612 MYH3P11055 1940 aa14.37□□□□□ -0.11
NEDD9-207ENST00000468612 IRF6O14896 467 aa14.36□□□□□ -0.11
NEDD9-207ENST00000468612 IL1R1P14778 569 aa14.36□□□□□ -0.11
NEDD9-207ENST00000468612 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
NEDD9-207ENST00000468612 PRKCZQ05513 592 aa14.36□□□□□ -0.11
NEDD9-207ENST00000468612 TMEM39BQ9GZU3 492 aa14.36□□□□□ -0.11
NEDD9-207ENST00000468612 LAS1LQ9Y4W2 734 aaKnown RBP14.36□□□□□ -0.11
NEDD9-207ENST00000468612 MUC3AQ02505 3323 aa14.36□□□□□ -0.11
NEDD9-207ENST00000468612 ARAP2Q8WZ64 1704 aa14.35□□□□□ -0.11
NEDD9-207ENST00000468612 SNAP23O00161 211 aa14.35□□□□□ -0.11
NEDD9-207ENST00000468612 PPIL2Q13356 520 aa14.35□□□□□ -0.11
NEDD9-207ENST00000468612 TDRD3Q9H7E2 651 aaKnown RBP14.35□□□□□ -0.11
NEDD9-207ENST00000468612 TFRCP02786 760 aaKnown RBP14.34□□□□□ -0.11
NEDD9-207ENST00000468612 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
NEDD9-207ENST00000468612 KCNJ4P48050 445 aa14.34□□□□□ -0.11
NEDD9-207ENST00000468612 CHRNDQ07001 517 aa14.34□□□□□ -0.11
NEDD9-207ENST00000468612 TDHQ8IZJ6 230 aa14.34□□□□□ -0.11
NEDD9-207ENST00000468612 PAWRQ96IZ0 340 aaKnown RBP14.34□□□□□ -0.11
NEDD9-207ENST00000468612 CRISPLD2Q9H0B8 497 aa14.34□□□□□ -0.11
NEDD9-207ENST00000468612 GABRQQ9UN88 632 aa14.34□□□□□ -0.11
NEDD9-207ENST00000468612 TCP10L2B9ZVM9 353 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 C7orf61Q8IZ16 206 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 PAK6Q9NQU5 681 aaPredicted RBP14.33□□□□□ -0.12
NEDD9-207ENST00000468612 SERPINA10Q9UK55 444 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 ZMYND8Q9ULU4 1186 aaPredicted RBP14.33□□□□□ -0.12
NEDD9-207ENST00000468612 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 RPTORQ8N122 1335 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 TTC28Q96AY4 2481 aa14.33□□□□□ -0.12
NEDD9-207ENST00000468612 PDHXO00330 501 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 ADCY3O60266 1144 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 INHAP05111 366 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 BCRP11274 1271 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 ITGA6P23229 1130 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 MAGEA10P43363 369 aaPredicted RBP14.32□□□□□ -0.12
NEDD9-207ENST00000468612 ZNF804AQ7Z570 1209 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 NECAB2Q7Z6G3 386 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 DZIP1LQ8IYY4 767 aaKnown RBP14.32□□□□□ -0.12
NEDD9-207ENST00000468612 DIS3LQ8TF46 1054 aaKnown RBP14.32□□□□□ -0.12
NEDD9-207ENST00000468612 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
NEDD9-207ENST00000468612 GUCD1Q96NT3 240 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 DEFB118Q96PH6 123 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 WRNIP1Q96S55 665 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
NEDD9-207ENST00000468612 TNNI2P48788 182 aa14.31□□□□□ -0.12
NEDD9-207ENST00000468612 FCGRTP55899 365 aa14.31□□□□□ -0.12
NEDD9-207ENST00000468612 PPATQ06203 517 aa14.31□□□□□ -0.12
NEDD9-207ENST00000468612 MOGSQ13724 837 aa14.31□□□□□ -0.12
NEDD9-207ENST00000468612 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
NEDD9-207ENST00000468612 TAF5LO75529 589 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
NEDD9-207ENST00000468612 ELNP15502 786 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 NEUROD2Q15784 382 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 FAM109BQ6ICB4 259 aaPredicted RBP14.3□□□□□ -0.12
NEDD9-207ENST00000468612 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
NEDD9-207ENST00000468612 PXYLP1Q8TE99 480 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 PLA2G12BQ9BX93 195 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 KCNH4Q9UQ05 1017 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
NEDD9-207ENST00000468612 MGAMO43451 1857 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 H7C1W4 665 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 CSF1RP07333 972 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 SYN1P17600 705 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 FLT3LGP49771 235 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
NEDD9-207ENST00000468612 TTF2Q9UNY4 1162 aaKnown RBP14.29□□□□□ -0.12
NEDD9-207ENST00000468612 A0A1B0GUL6 1792 aa14.28□□□□□ -0.12
NEDD9-207ENST00000468612 CRKP46108 304 aa14.28□□□□□ -0.12
NEDD9-207ENST00000468612 IRF5Q13568 498 aa14.28□□□□□ -0.12
NEDD9-207ENST00000468612 MFSD14BQ5SR56 506 aa14.28□□□□□ -0.12
NEDD9-207ENST00000468612 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
NEDD9-207ENST00000468612 UBE2OQ9C0C9 1292 aaKnown RBP14.28□□□□□ -0.12
NEDD9-207ENST00000468612 COL2A1P02458 1487 aaPredicted RBP14.27□□□□□ -0.12
NEDD9-207ENST00000468612 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.13
NEDD9-207ENST00000468612 CWF19L2Q2TBE0 894 aaKnown RBP14.27□□□□□ -0.13
NEDD9-207ENST00000468612 KSR2Q6VAB6 950 aa14.27□□□□□ -0.13
NEDD9-207ENST00000468612 UBE3BQ7Z3V4 1068 aa14.27□□□□□ -0.13
NEDD9-207ENST00000468612 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms