RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 CRYBG1Q9Y4K1 1723 aa7.12□□□□□ -1.27
SHQ1-205ENST00000468371 FZD9O00144 591 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TRPA1O75762 1119 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TIMM10P62072 90 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 PRAMEF18Q5VWM3 479 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TBC1D32Q96NH3 1257 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 CCDC8Q9H0W5 538 aaPredicted RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 IL1RAPL2Q9NP60 686 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 COL3A1P02461 1466 aaPredicted RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TRAF5O00463 557 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 MCCP23508 829 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 PUS3Q9BZE2 481 aaKnown RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 SNAP23O00161 211 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 RPAP2Q8IXW5 612 aaPredicted RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TEX11Q8IYF3 940 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TNPO1Q92973 898 aaKnown RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 EXOC6BQ9Y2D4 811 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 CA12O43570 354 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 MYCNP04198 464 aaPredicted RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 HSPA1AP0DMV8 641 aaKnown RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 HSPA1BP0DMV9 641 aaKnown RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TRIM27P14373 513 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 CYP7A1P22680 504 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 LRRC24Q50LG9 513 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 RGMBQ6NW40 437 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TRMT2AQ8IZ69 625 aaKnown RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 RILPL2Q969X0 211 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 KIF1BPQ96EK5 621 aa7.11□□□□□ -1.27
SHQ1-205ENST00000468371 TDRD3Q9H7E2 651 aaKnown RBP7.11□□□□□ -1.27
SHQ1-205ENST00000468371 A0A1B0GUL7 405 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 GOLGA6L4A6NEF3 574 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 FGD1P98174 961 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 TTF1Q15361 905 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-205ENST00000468371 KLRG1Q96E93 195 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 NACAP1Q9BZK3 213 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 DEFB129Q9H1M3 183 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 TMOD4Q9NZQ9 345 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 FBXO3Q9UK99 471 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 ADM5C9JUS6 153 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 TPM2P07951 284 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 RLBP1P12271 317 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 TFCP2Q12800 502 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 USP44Q9H0E7 712 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 KLRG2A4D1S0 409 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-205ENST00000468371 RASA3Q14644 834 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 SYAP1Q96A49 352 aaPredicted RBP7.1□□□□□ -1.27
SHQ1-205ENST00000468371 TMEM106CQ9BVX2 250 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 PODXL2Q9NZ53 605 aa7.1□□□□□ -1.27
SHQ1-205ENST00000468371 SCAF8Q9UPN6 1271 aaKnown RBP7.1□□□□□ -1.27
SHQ1-205ENST00000468371 MYCP01106 439 aaPredicted RBP7.09□□□□□ -1.27
SHQ1-205ENST00000468371 CRKP46108 304 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 CCDC173Q0VFZ6 552 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 PABPC4Q13310 644 aaKnown RBP eCLIP7.09□□□□□ -1.27
SHQ1-205ENST00000468371 PLA2G12BQ9BX93 195 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 ZNF287Q9HBT7 754 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 ANKRD26Q9UPS8 1709 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 POTEIP0CG38 1075 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 POTEJP0CG39 1038 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 CLCN1P35523 988 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 XAGE2Q96GT9 111 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 L3MBTL3Q96JM7 780 aaPredicted RBP7.09□□□□□ -1.27
SHQ1-205ENST00000468371 CRNKL1Q9BZJ0 848 aaKnown RBP7.09□□□□□ -1.27
SHQ1-205ENST00000468371 LRRCC1Q9C099 1032 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 PRDM10Q9NQV6 1147 aa7.09□□□□□ -1.27
SHQ1-205ENST00000468371 ALDH1A1P00352 501 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 CDK11BP21127 795 aaKnown RBP7.09□□□□□ -1.28
SHQ1-205ENST00000468371 SLC4A8Q2Y0W8 1093 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 GADL1Q6ZQY3 521 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 TRPM4Q8TD43 1214 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 CDCA5Q96FF9 252 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 FSD1Q9BTV5 496 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 MXD3Q9BW11 206 aa7.09□□□□□ -1.28
SHQ1-205ENST00000468371 TNS1Q9HBL0 1735 aaKnown RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 WDR33Q9C0J8 1336 aaKnown RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 K7ELQ4 463 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 SEMA3EO15041 775 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 DHX16O60231 1041 aaKnown RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 VIL1P09327 827 aaKnown RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 WRNIP1Q96S55 665 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 MKNK2Q9HBH9 465 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 RAB11FIP3O75154 756 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 FMNL1O95466 1100 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 IRX3P78415 501 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 NUCB2P80303 420 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 TAF1CQ15572 869 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 OTUD5Q96G74 571 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 CSRNP1Q96S65 589 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 TSKSQ9UJT2 592 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 NAP1L2Q9ULW6 460 aaPredicted RBP7.08□□□□□ -1.28
SHQ1-205ENST00000468371 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 UQCRHLA0A096LP55 91 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 CSF1RP07333 972 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 UQCRHP07919 91 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 HOXD10P28358 340 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 TDO2P48775 406 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms