RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 LBX1P52954 281 aa21.22■□□□□ 0.99
SSBP1-207ENST00000468267 HDLBPQ00341 1268 aaKnown RBP21.22■□□□□ 0.99
SSBP1-207ENST00000468267 SUGT1Q9Y2Z0 365 aa21.22■□□□□ 0.99
SSBP1-207ENST00000468267 PPP2R3BQ9Y5P8 575 aa21.22■□□□□ 0.99
SSBP1-207ENST00000468267 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
SSBP1-207ENST00000468267 TTLL12Q14166 644 aaPredicted RBP21.21■□□□□ 0.99
SSBP1-207ENST00000468267 SPDYE2Q495Y8 402 aa21.21■□□□□ 0.99
SSBP1-207ENST00000468267 WDR66Q8TBY9 1149 aa21.21■□□□□ 0.99
SSBP1-207ENST00000468267 MRIQ9BWK5 157 aa21.21■□□□□ 0.99
SSBP1-207ENST00000468267 VEZTQ9HBM0 779 aa21.21■□□□□ 0.99
SSBP1-207ENST00000468267 GNL3LQ9NVN8 582 aaKnown RBP21.21■□□□□ 0.99
SSBP1-207ENST00000468267 TFCP2Q12800 502 aa21.2■□□□□ 0.98
SSBP1-207ENST00000468267 ITPRIPQ8IWB1 547 aa21.2■□□□□ 0.98
SSBP1-207ENST00000468267 TDRD3Q9H7E2 651 aaKnown RBP21.2■□□□□ 0.98
SSBP1-207ENST00000468267 ZNF70Q9UC06 446 aaPredicted RBP21.2■□□□□ 0.98
SSBP1-207ENST00000468267 ZBTB7BO15156 539 aaPredicted RBP21.19■□□□□ 0.98
SSBP1-207ENST00000468267 CA12O43570 354 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 ADORA1P30542 326 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 PHKA1P46020 1223 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 TIMM10P62072 90 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 KIF23Q02241 960 aaPredicted RBP21.19■□□□□ 0.98
SSBP1-207ENST00000468267 ARMC9Q7Z3E5 817 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 RASAL3Q86YV0 1011 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 TNS4Q8IZW8 715 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 AKAP2Q9Y2D5 859 aa21.19■□□□□ 0.98
SSBP1-207ENST00000468267 ZBTB22O15209 634 aa21.18■□□□□ 0.98
SSBP1-207ENST00000468267 RASA3Q14644 834 aa21.18■□□□□ 0.98
SSBP1-207ENST00000468267 MAST3O60307 1309 aa21.18■□□□□ 0.98
SSBP1-207ENST00000468267 AKAP11Q9UKA4 1901 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 SEMA3EO15041 775 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 ATP8B2P98198 1209 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
SSBP1-207ENST00000468267 TNFAIP1Q13829 316 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 PRKG1Q13976 671 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 POLA2Q14181 598 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 SUPT20HL1Q3ZLR7 823 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 DENND2AQ9ULE3 1009 aa21.17■□□□□ 0.98
SSBP1-207ENST00000468267 A0A1B0GUL7 405 aa21.16■□□□□ 0.98
SSBP1-207ENST00000468267 LDLRAD1Q5T700 205 aa21.16■□□□□ 0.98
SSBP1-207ENST00000468267 NBPF12Q5TAG4 269 aaPredicted RBP21.16■□□□□ 0.98
SSBP1-207ENST00000468267 HHIPL2Q6UWX4 724 aa21.16■□□□□ 0.98
SSBP1-207ENST00000468267 SSH3Q8TE77 659 aa21.16■□□□□ 0.98
SSBP1-207ENST00000468267 ZDHHC15Q96MV8 337 aa21.16■□□□□ 0.98
SSBP1-207ENST00000468267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.16■□□□□ 0.98
SSBP1-207ENST00000468267 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
SSBP1-207ENST00000468267 XAGE2Q96GT9 111 aa21.15■□□□□ 0.98
SSBP1-207ENST00000468267 CSRNP1Q96S65 589 aa21.15■□□□□ 0.98
SSBP1-207ENST00000468267 C1orf115Q9H7X2 142 aa21.15■□□□□ 0.98
SSBP1-207ENST00000468267 TSKSQ9UJT2 592 aa21.15■□□□□ 0.98
SSBP1-207ENST00000468267 ANGEL1Q9UNK9 670 aaKnown RBP21.15■□□□□ 0.98
SSBP1-207ENST00000468267 SSC5DA1L4H1 1573 aa21.14■□□□□ 0.98
SSBP1-207ENST00000468267 SALL1Q9NSC2 1324 aa21.14■□□□□ 0.97
SSBP1-207ENST00000468267 PPP1R12BO60237 982 aaPredicted RBP21.14■□□□□ 0.97
SSBP1-207ENST00000468267 MS4A1P11836 297 aa21.14■□□□□ 0.97
SSBP1-207ENST00000468267 MAP3K11Q16584 847 aa21.14■□□□□ 0.97
SSBP1-207ENST00000468267 APOBEC3HQ6NTF7 200 aaKnown RBP21.14■□□□□ 0.97
SSBP1-207ENST00000468267 REM2Q8IYK8 340 aaPredicted RBP21.14■□□□□ 0.97
SSBP1-207ENST00000468267 FZD1Q9UP38 647 aa21.14■□□□□ 0.97
SSBP1-207ENST00000468267 TCP10L2B9ZVM9 353 aa21.13■□□□□ 0.97
SSBP1-207ENST00000468267 MVPQ14764 893 aaKnown RBP21.13■□□□□ 0.97
SSBP1-207ENST00000468267 NEUROD6Q96NK8 337 aa21.13■□□□□ 0.97
SSBP1-207ENST00000468267 CASP8AP2Q9UKL3 1982 aa21.13■□□□□ 0.97
SSBP1-207ENST00000468267 PDS5AQ29RF7 1337 aaKnown RBP21.12■□□□□ 0.97
SSBP1-207ENST00000468267 LDHBP07195 334 aaKnown RBP21.12■□□□□ 0.97
SSBP1-207ENST00000468267 PRDX5P30044 214 aa21.12■□□□□ 0.97
SSBP1-207ENST00000468267 TNNI2P48788 182 aa21.12■□□□□ 0.97
SSBP1-207ENST00000468267 RASGRF1Q13972 1273 aa21.12■□□□□ 0.97
SSBP1-207ENST00000468267 TEPSINQ96N21 525 aa21.12■□□□□ 0.97
SSBP1-207ENST00000468267 RNF216Q9NWF9 866 aaPredicted RBP21.12■□□□□ 0.97
SSBP1-207ENST00000468267 UNCXA6NJT0 531 aa21.11■□□□□ 0.97
SSBP1-207ENST00000468267 USP2O75604 605 aaPredicted RBP21.11■□□□□ 0.97
SSBP1-207ENST00000468267 FKBP1CQ5VVH2 108 aa21.11■□□□□ 0.97
SSBP1-207ENST00000468267 TMEM39BQ9GZU3 492 aa21.11■□□□□ 0.97
SSBP1-207ENST00000468267 SAGE1Q9NXZ1 904 aa21.11■□□□□ 0.97
SSBP1-207ENST00000468267 RCAN3Q9UKA8 241 aa21.11■□□□□ 0.97
SSBP1-207ENST00000468267 MYH2Q9UKX2 1941 aa21.1■□□□□ 0.97
SSBP1-207ENST00000468267 CACNB3P54284 484 aa21.1■□□□□ 0.97
SSBP1-207ENST00000468267 DIXDC1Q155Q3 683 aa21.1■□□□□ 0.97
SSBP1-207ENST00000468267 ZGPATQ8N5A5 531 aaKnown RBP21.1■□□□□ 0.97
SSBP1-207ENST00000468267 RNF186Q9NXI6 227 aa21.1■□□□□ 0.97
SSBP1-207ENST00000468267 TMOD2Q9NZR1 351 aa21.1■□□□□ 0.97
SSBP1-207ENST00000468267 SURF6O75683 361 aaKnown RBP21.09■□□□□ 0.97
SSBP1-207ENST00000468267 IREB2P48200 963 aaKnown RBP21.09■□□□□ 0.97
SSBP1-207ENST00000468267 OS9Q13438 667 aaPredicted RBP21.09■□□□□ 0.97
SSBP1-207ENST00000468267 GORABQ5T7V8 394 aa21.09■□□□□ 0.97
SSBP1-207ENST00000468267 FAM83AQ86UY5 434 aa21.09■□□□□ 0.97
SSBP1-207ENST00000468267 CDAN1Q8IWY9 1227 aa21.09■□□□□ 0.97
SSBP1-207ENST00000468267 SLC10A4Q96EP9 437 aa21.09■□□□□ 0.97
SSBP1-207ENST00000468267 GPR108Q9NPR9 543 aa21.09■□□□□ 0.97
SSBP1-207ENST00000468267 NOP58Q9Y2X3 529 aaKnown RBP21.09■□□□□ 0.97
SSBP1-207ENST00000468267 DAGLAQ9Y4D2 1042 aa21.09■□□□□ 0.97
SSBP1-207ENST00000468267 TRPA1O75762 1119 aa21.08■□□□□ 0.97
SSBP1-207ENST00000468267 SPRYD7Q5W111 196 aa21.08■□□□□ 0.97
SSBP1-207ENST00000468267 CEP85Q6P2H3 762 aa21.08■□□□□ 0.97
SSBP1-207ENST00000468267 CLMNQ96JQ2 1002 aa21.08■□□□□ 0.97
SSBP1-207ENST00000468267 TM4SF4P48230 202 aa21.07■□□□□ 0.96
SSBP1-207ENST00000468267 MKRN3Q13064 507 aaKnown RBP21.07■□□□□ 0.96
SSBP1-207ENST00000468267 SPTY2D1Q68D10 685 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms