RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 USP2O75604 605 aaPredicted RBP18.48■□□□□ 0.55
ATPAF2-204ENST00000467560 PA2G4Q9UQ80 394 aaKnown RBP18.48■□□□□ 0.55
ATPAF2-204ENST00000467560 TCP10L2B9ZVM9 353 aa18.47■□□□□ 0.55
ATPAF2-204ENST00000467560 CACNB3P54284 484 aa18.47■□□□□ 0.55
ATPAF2-204ENST00000467560 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
ATPAF2-204ENST00000467560 TMEM39BQ9GZU3 492 aa18.47■□□□□ 0.55
ATPAF2-204ENST00000467560 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
ATPAF2-204ENST00000467560 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
ATPAF2-204ENST00000467560 IFIT1P09914 478 aaKnown RBP18.46■□□□□ 0.55
ATPAF2-204ENST00000467560 GJA5P36382 358 aa18.46■□□□□ 0.55
ATPAF2-204ENST00000467560 LPIN2Q92539 896 aa18.46■□□□□ 0.55
ATPAF2-204ENST00000467560 SLC10A4Q96EP9 437 aa18.46■□□□□ 0.55
ATPAF2-204ENST00000467560 PPP1R12BO60237 982 aaPredicted RBP18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 BCAR3O75815 825 aa18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 INTS3Q68E01 1043 aaKnown RBP18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 WNK4Q96J92 1243 aa18.45■□□□□ 0.54
ATPAF2-204ENST00000467560 CIAO1O76071 339 aa18.44■□□□□ 0.54
ATPAF2-204ENST00000467560 SLC5A1P13866 664 aa18.44■□□□□ 0.54
ATPAF2-204ENST00000467560 MIER1Q8N108 512 aa18.44■□□□□ 0.54
ATPAF2-204ENST00000467560 ARHGAP45Q92619 1136 aa18.44■□□□□ 0.54
ATPAF2-204ENST00000467560 IGF2BP3O00425 579 aaKnown RBP eCLIP18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 SREBF2Q12772 1141 aa18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 ATP2B3Q16720 1220 aa18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 CTU1Q7Z7A3 348 aaKnown RBP18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 TEKT1Q969V4 418 aa18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
ATPAF2-204ENST00000467560 GPR25O00155 361 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 TRIM27P14373 513 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 ADORA1P30542 326 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 IREB2P48200 963 aaKnown RBP18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 TNFAIP1Q13829 316 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 ELP3Q9H9T3 547 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
ATPAF2-204ENST00000467560 OTOFQ9HC10 1997 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 ZBTB48P10074 688 aaPredicted RBP18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 IL15P40933 162 aaPredicted RBP18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 PHKA1P46020 1223 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 RGS19P49795 217 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 IFNL1Q8IU54 200 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 MRIQ9BWK5 157 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 FBXO3Q9UK99 471 aa18.41■□□□□ 0.54
ATPAF2-204ENST00000467560 MANSC4A6NHS7 340 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-204ENST00000467560 UNCXA6NJT0 531 aa18.4■□□□□ 0.54
ATPAF2-204ENST00000467560 DIXDC1Q155Q3 683 aa18.4■□□□□ 0.54
ATPAF2-204ENST00000467560 ANKRD13AQ8IZ07 590 aa18.4■□□□□ 0.54
ATPAF2-204ENST00000467560 PTPN18Q99952 460 aa18.4■□□□□ 0.54
ATPAF2-204ENST00000467560 CFHR5Q9BXR6 569 aa18.4■□□□□ 0.54
ATPAF2-204ENST00000467560 PRDX5P30044 214 aa18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 VGLL4Q14135 290 aa18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 HHIPL2Q6UWX4 724 aa18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 CLUAP1Q96AJ1 413 aa18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 SUGT1Q9Y2Z0 365 aa18.39■□□□□ 0.53
ATPAF2-204ENST00000467560 HTTP42858 3142 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 TIMM10P62072 90 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 WDR66Q8TBY9 1149 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 OPTNQ96CV9 577 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 DAGLAQ9Y4D2 1042 aa18.38■□□□□ 0.53
ATPAF2-204ENST00000467560 TNRC18O15417 2968 aaPredicted RBP18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 TNNI2P48788 182 aa18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 TFCP2Q12800 502 aa18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 MTX1Q13505 466 aa18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 NOM1Q5C9Z4 860 aaKnown RBP18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 MS4A4AQ96JQ5 239 aa18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 HPS5Q9UPZ3 1129 aa18.37■□□□□ 0.53
ATPAF2-204ENST00000467560 TESPA1A2RU30 521 aaPredicted RBP18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 MAST3O60307 1309 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 LAMB1P07942 1786 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 GNAI3P08754 354 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 SOX10P56693 466 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 INHBEP58166 350 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 MAP3K9P80192 1104 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 NFIAQ12857 509 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 CDC42EP5Q6NZY7 148 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 FAM83AQ86UY5 434 aa18.36■□□□□ 0.53
ATPAF2-204ENST00000467560 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 FKTNO75072 461 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 CAP1Q01518 475 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 MLLT1Q03111 559 aaPredicted RBP18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 CRHR2Q13324 411 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 FKBP1CQ5VVH2 108 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 HDAC5Q9UQL6 1122 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
ATPAF2-204ENST00000467560 SALL1Q9NSC2 1324 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 MYH13Q9UKX3 1938 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms