RNA–Protein interactions for RNA: ENST00000467286.1

CRAMP1-205, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 664 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-205ENST00000467286 MAST3O60307 1309 aa17.39■□□□□ 0.37
CRAMP1-205ENST00000467286 AOX1Q06278 1338 aa17.39■□□□□ 0.37
CRAMP1-205ENST00000467286 MANSC4A6NHS7 340 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-205ENST00000467286 HDLBPQ00341 1268 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-205ENST00000467286 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-205ENST00000467286 TEKT1Q969V4 418 aa17.38■□□□□ 0.37
CRAMP1-205ENST00000467286 TDRD3Q9H7E2 651 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-205ENST00000467286 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 FGFR2P21802 821 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 RFX5P48382 616 aaPredicted RBP17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 BCAMP50895 628 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 LPIN2Q92539 896 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 SUGT1Q9Y2Z0 365 aa17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 TNRC18O15417 2968 aaPredicted RBP17.37■□□□□ 0.37
CRAMP1-205ENST00000467286 INHBEP58166 350 aa17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 ANKRD13AQ8IZ07 590 aa17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 WNK4Q96J92 1243 aa17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 CLMNQ96JQ2 1002 aa17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 CFHR5Q9BXR6 569 aa17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 TMOD2Q9NZR1 351 aa17.36■□□□□ 0.37
CRAMP1-205ENST00000467286 TCP10L2B9ZVM9 353 aa17.35■□□□□ 0.37
CRAMP1-205ENST00000467286 CIAO1O76071 339 aa17.35■□□□□ 0.37
CRAMP1-205ENST00000467286 MLLT1Q03111 559 aaPredicted RBP17.35■□□□□ 0.37
CRAMP1-205ENST00000467286 SIL1Q9H173 461 aa17.35■□□□□ 0.37
CRAMP1-205ENST00000467286 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
CRAMP1-205ENST00000467286 GPR25O00155 361 aa17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 RGS19P49795 217 aa17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 RARSP54136 660 aaKnown RBP17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 GRIK5Q16478 980 aa17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 PKN2Q16513 984 aaKnown RBP17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 ATG9AQ7Z3C6 839 aa17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 WDR66Q8TBY9 1149 aa17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
CRAMP1-205ENST00000467286 USP2O75604 605 aaPredicted RBP17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 ATP2B3Q16720 1220 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 IFNL1Q8IU54 200 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 ARHGAP45Q92619 1136 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 ZDHHC15Q96MV8 337 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 TMEM39BQ9GZU3 492 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 HTTP42858 3142 aa17.33■□□□□ 0.36
CRAMP1-205ENST00000467286 FKTNO75072 461 aa17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 IL15P40933 162 aaPredicted RBP17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 HOOK2Q96ED9 719 aa17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 TEPSINQ96N21 525 aa17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
CRAMP1-205ENST00000467286 MYH2Q9UKX2 1941 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 RPAP1Q9BWH6 1393 aaPredicted RBP17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 GNAI3P08754 354 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 HHIPL2Q6UWX4 724 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 MEIS3Q99687 375 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 CSADQ9Y600 493 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 PDE4DIPQ5VU43 2346 aa17.31■□□□□ 0.36
CRAMP1-205ENST00000467286 CENPFP49454 3210 aa17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 CACNB3P54284 484 aa17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 FKBP1CQ5VVH2 108 aa17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 FAM83AQ86UY5 434 aa17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
CRAMP1-205ENST00000467286 IGF2BP3O00425 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
CRAMP1-205ENST00000467286 SEMA3EO15041 775 aa17.29■□□□□ 0.36
CRAMP1-205ENST00000467286 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
CRAMP1-205ENST00000467286 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
CRAMP1-205ENST00000467286 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 GJA5P36382 358 aa17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 VGLL4Q14135 290 aa17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 DENND2AQ9ULE3 1009 aa17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 PA2G4Q9UQ80 394 aaKnown RBP17.28■□□□□ 0.36
CRAMP1-205ENST00000467286 SALL1Q9NSC2 1324 aa17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 LDHBP07195 334 aaKnown RBP17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 SOX10P56693 466 aa17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 MAP3K9P80192 1104 aa17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 DCAF15Q66K64 600 aa17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 FBXO46Q6PJ61 603 aaPredicted RBP17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 R3HDMLQ9H3Y0 253 aa17.27■□□□□ 0.36
CRAMP1-205ENST00000467286 TESPA1A2RU30 521 aaPredicted RBP17.26■□□□□ 0.35
CRAMP1-205ENST00000467286 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
CRAMP1-205ENST00000467286 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
CRAMP1-205ENST00000467286 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
CRAMP1-205ENST00000467286 DAGLAQ9Y4D2 1042 aa17.26■□□□□ 0.35
CRAMP1-205ENST00000467286 TRIM27P14373 513 aa17.25■□□□□ 0.35
CRAMP1-205ENST00000467286 PRDX5P30044 214 aa17.25■□□□□ 0.35
CRAMP1-205ENST00000467286 PHKA1P46020 1223 aa17.25■□□□□ 0.35
CRAMP1-205ENST00000467286 GTF2A2P52657 109 aa17.25■□□□□ 0.35
CRAMP1-205ENST00000467286 CRHR2Q13324 411 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms