RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
SRRT-207ENST00000466432 FKTNO75072 461 aa16.5■□□□□ 0.23
SRRT-207ENST00000466432 INHBEP58166 350 aa16.5■□□□□ 0.23
SRRT-207ENST00000466432 SUPT20HL1Q3ZLR7 823 aa16.5■□□□□ 0.23
SRRT-207ENST00000466432 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
SRRT-207ENST00000466432 DZIP1LQ8IYY4 767 aaKnown RBP16.5■□□□□ 0.23
SRRT-207ENST00000466432 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
SRRT-207ENST00000466432 SLC10A4Q96EP9 437 aa16.5■□□□□ 0.23
SRRT-207ENST00000466432 SMC4Q9NTJ3 1288 aa16.5■□□□□ 0.23
SRRT-207ENST00000466432 RBBP6Q7Z6E9 1792 aaKnown RBP16.5■□□□□ 0.23
SRRT-207ENST00000466432 ALDH1A1P00352 501 aa16.49■□□□□ 0.23
SRRT-207ENST00000466432 FGFR2P21802 821 aa16.49■□□□□ 0.23
SRRT-207ENST00000466432 CRKP46108 304 aa16.49■□□□□ 0.23
SRRT-207ENST00000466432 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
SRRT-207ENST00000466432 CAP1Q01518 475 aa16.49■□□□□ 0.23
SRRT-207ENST00000466432 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
SRRT-207ENST00000466432 PTPN18Q99952 460 aa16.49■□□□□ 0.23
SRRT-207ENST00000466432 PDE8BO95263 885 aa16.48■□□□□ 0.23
SRRT-207ENST00000466432 RBM5P52756 815 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRRT-207ENST00000466432 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.48■□□□□ 0.23
SRRT-207ENST00000466432 ANKRD13AQ8IZ07 590 aa16.48■□□□□ 0.23
SRRT-207ENST00000466432 MS4A4AQ96JQ5 239 aa16.48■□□□□ 0.23
SRRT-207ENST00000466432 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
SRRT-207ENST00000466432 IREB2P48200 963 aaKnown RBP16.47■□□□□ 0.23
SRRT-207ENST00000466432 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
SRRT-207ENST00000466432 ALDH1L2Q3SY69 923 aa16.47■□□□□ 0.23
SRRT-207ENST00000466432 PDE4DIPQ5VU43 2346 aa16.47■□□□□ 0.23
SRRT-207ENST00000466432 CENPFP49454 3210 aa16.47■□□□□ 0.23
SRRT-207ENST00000466432 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
SRRT-207ENST00000466432 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
SRRT-207ENST00000466432 TNFAIP1Q13829 316 aa16.46■□□□□ 0.23
SRRT-207ENST00000466432 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
SRRT-207ENST00000466432 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.23
SRRT-207ENST00000466432 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
SRRT-207ENST00000466432 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.23
SRRT-207ENST00000466432 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
SRRT-207ENST00000466432 BCAMP50895 628 aa16.45■□□□□ 0.22
SRRT-207ENST00000466432 CRHR2Q13324 411 aa16.45■□□□□ 0.22
SRRT-207ENST00000466432 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
SRRT-207ENST00000466432 MKI67P46013 3256 aaKnown RBP16.44■□□□□ 0.22
SRRT-207ENST00000466432 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
SRRT-207ENST00000466432 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 TBC1D22AQ8WUA7 517 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 OPTNQ96CV9 577 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 ELP3Q9H9T3 547 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
SRRT-207ENST00000466432 CACNB3P54284 484 aa16.43■□□□□ 0.22
SRRT-207ENST00000466432 CHAF1AQ13111 956 aaPredicted RBP16.43■□□□□ 0.22
SRRT-207ENST00000466432 VGLL4Q14135 290 aa16.43■□□□□ 0.22
SRRT-207ENST00000466432 BRI3BPQ8WY22 251 aa16.43■□□□□ 0.22
SRRT-207ENST00000466432 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
SRRT-207ENST00000466432 BRCA2P51587 3418 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 RPAP1Q9BWH6 1393 aaPredicted RBP16.42■□□□□ 0.22
SRRT-207ENST00000466432 EYA2O00167 538 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
SRRT-207ENST00000466432 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 TRIM17Q9Y577 477 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 SNCAIPQ9Y6H5 919 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
SRRT-207ENST00000466432 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
SRRT-207ENST00000466432 VPS37DQ86XT2 251 aa16.41■□□□□ 0.22
SRRT-207ENST00000466432 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
SRRT-207ENST00000466432 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
SRRT-207ENST00000466432 TNNI2P48788 182 aa16.4■□□□□ 0.22
SRRT-207ENST00000466432 RARSP54136 660 aaKnown RBP16.4■□□□□ 0.22
SRRT-207ENST00000466432 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
SRRT-207ENST00000466432 FKBP1CQ5VVH2 108 aa16.4■□□□□ 0.22
SRRT-207ENST00000466432 HHIPL2Q6UWX4 724 aa16.4■□□□□ 0.22
SRRT-207ENST00000466432 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
SRRT-207ENST00000466432 PTPN22Q9Y2R2 807 aa16.4■□□□□ 0.22
SRRT-207ENST00000466432 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
SRRT-207ENST00000466432 PRPF38BQ5VTL8 546 aaKnown RBP16.39■□□□□ 0.21
SRRT-207ENST00000466432 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.21
SRRT-207ENST00000466432 LPIN2Q92539 896 aa16.39■□□□□ 0.21
SRRT-207ENST00000466432 ERO1AQ96HE7 468 aa16.39■□□□□ 0.21
SRRT-207ENST00000466432 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.21
SRRT-207ENST00000466432 POTEFA5A3E0 1075 aa16.38■□□□□ 0.21
SRRT-207ENST00000466432 ZBTB22O15209 634 aa16.38■□□□□ 0.21
SRRT-207ENST00000466432 SP3Q02447 781 aa16.38■□□□□ 0.21
SRRT-207ENST00000466432 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
SRRT-207ENST00000466432 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
SRRT-207ENST00000466432 MAST3O60307 1309 aa16.38■□□□□ 0.21
SRRT-207ENST00000466432 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
SRRT-207ENST00000466432 CIAO1O76071 339 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 PRDX5P30044 214 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 GTF2A2P52657 109 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 CCL15Q16663 113 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 ARMC5Q96C12 935 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 OTUD5Q96G74 571 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 DAGLAQ9Y4D2 1042 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
SRRT-207ENST00000466432 SLC5A1P13866 664 aa16.36■□□□□ 0.21
SRRT-207ENST00000466432 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
SRRT-207ENST00000466432 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
SRRT-207ENST00000466432 CSADQ9Y600 493 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms