RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
VCP-204ENST00000466100 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 FSD1Q9BTV5 496 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 LRP2BPQ9P2M1 347 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 SCN4AP35499 1836 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
VCP-204ENST00000466100 MAP3K12Q12852 859 aa13.49□□□□□ -0.25
VCP-204ENST00000466100 SLFNL1Q499Z3 407 aa13.49□□□□□ -0.25
VCP-204ENST00000466100 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
VCP-204ENST00000466100 AGBL3Q8NEM8 1001 aa13.49□□□□□ -0.25
VCP-204ENST00000466100 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
VCP-204ENST00000466100 DDX60LQ5H9U9 1706 aaKnown RBP13.48□□□□□ -0.25
VCP-204ENST00000466100 GAKO14976 1311 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 RNF113AO15541 343 aaKnown RBP13.48□□□□□ -0.25
VCP-204ENST00000466100 ZFYP08048 801 aaPredicted RBP13.48□□□□□ -0.25
VCP-204ENST00000466100 CHMLP26374 656 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 GMPSP49915 693 aaPredicted RBP13.48□□□□□ -0.25
VCP-204ENST00000466100 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 SLC9C2Q5TAH2 1124 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 ADGRA1Q86SQ6 560 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 GPC2Q8N158 579 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 MAGEB6Q8N7X4 407 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■■□□□ 13.6
VCP-204ENST00000466100 RAI14Q9P0K7 980 aa13.48□□□□□ -0.25
VCP-204ENST00000466100 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
VCP-204ENST00000466100 MROH7-TTC4A0A0A0MT08 1334 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 MAST3O60307 1309 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 CDC45O75419 566 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 SCNN1DP51172 638 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 HDLBPQ00341 1268 aaKnown RBP13.47□□□□□ -0.25
VCP-204ENST00000466100 DIXDC1Q155Q3 683 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 ZMYM1Q5SVZ6 1142 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 NAA16Q6N069 864 aaPredicted RBP13.47□□□□□ -0.25
VCP-204ENST00000466100 ZSCAN25Q6NSZ9 544 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 DZIP1Q86YF9 867 aaKnown RBP13.47□□□□□ -0.25
VCP-204ENST00000466100 DPF2Q92785 391 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
VCP-204ENST00000466100 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 IL25Q9H293 177 aa13.47□□□□□ -0.25
VCP-204ENST00000466100 NAV1Q8NEY1 1877 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 SHTN1A0MZ66 631 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 HIP1O00291 1037 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 ZNF280AP59817 542 aaPredicted RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 NMIQ13287 307 aaPredicted RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 HHIPL2Q6UWX4 724 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 APPBP2Q92624 585 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 OSBP2Q969R2 916 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 L3MBTL3Q96JM7 780 aaPredicted RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 MRIQ9BWK5 157 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 SERPINA10Q9UK55 444 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 GJA3Q9Y6H8 435 aa13.46□□□□□ -0.25
VCP-204ENST00000466100 BAZ2AQ9UIF9 1905 aaKnown RBP13.46□□□□□ -0.25
VCP-204ENST00000466100 LAMA4Q16363 1823 aa13.46□□□□□ -0.26
VCP-204ENST00000466100 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 CYP7A1P22680 504 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 CRKP46108 304 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 MMP14P50281 582 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 GSTO1P78417 241 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 ZBED3Q96IU2 234 aaPredicted RBP13.45□□□□□ -0.26
VCP-204ENST00000466100 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
VCP-204ENST00000466100 RIOK1Q9BRS2 568 aaKnown RBP13.45□□□□□ -0.26
VCP-204ENST00000466100 PUS7LQ9H0K6 701 aaKnown RBP13.45□□□□□ -0.26
VCP-204ENST00000466100 DIAPH3Q9NSV4 1193 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 GPRC5DQ9NZD1 345 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
VCP-204ENST00000466100 RAD50Q92878 1312 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 GPR75-ASB3A0A0A6YYF3 556 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 M0R2C6 588 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 MTMR14Q8NCE2 650 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 LAMB1P07942 1786 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 MYH1P12882 1939 aa13.44□□□□□ -0.26
VCP-204ENST00000466100 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
VCP-204ENST00000466100 SGSM2O43147 1006 aa13.43□□□□□ -0.26
VCP-204ENST00000466100 PPP4CP60510 307 aa13.43□□□□□ -0.26
VCP-204ENST00000466100 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
VCP-204ENST00000466100 CWC27Q6UX04 472 aaKnown RBP13.43□□□□□ -0.26
VCP-204ENST00000466100 ZNF589Q86UQ0 364 aaPredicted RBP13.43□□□□□ -0.26
VCP-204ENST00000466100 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
VCP-204ENST00000466100 MICALL2Q8IY33 904 aa13.43□□□□□ -0.26
VCP-204ENST00000466100 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
VCP-204ENST00000466100 CNOT7Q9UIV1 285 aaKnown RBP13.43□□□□□ -0.26
VCP-204ENST00000466100 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 FOXP2O15409 715 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 EGFRP00533 1210 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 LDHCP07864 332 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 RHBDL3P58872 404 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms