RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SPDYE2BA6NHP3 402 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 GPR25O00155 361 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 SPDYE6P0CI01 402 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 PKN2Q16513 984 aaKnown RBP21.55■■□□□ 1.04
CPSF4-209ENST00000465132 MAP3K11Q16584 847 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 HSP90AB4PQ58FF6 505 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 CEP85Q6P2H3 762 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 PRMT6Q96LA8 375 aaPredicted RBP21.55■■□□□ 1.04
CPSF4-209ENST00000465132 CFHR5Q9BXR6 569 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 HPS5Q9UPZ3 1129 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 JAG2Q9Y219 1238 aa21.55■■□□□ 1.04
CPSF4-209ENST00000465132 CLRN2A0PK11 232 aa21.54■■□□□ 1.04
CPSF4-209ENST00000465132 MYO1BO43795 1136 aa21.54■■□□□ 1.04
CPSF4-209ENST00000465132 EXOC6Q8TAG9 804 aa21.54■■□□□ 1.04
CPSF4-209ENST00000465132 C1orf115Q9H7X2 142 aa21.54■■□□□ 1.04
CPSF4-209ENST00000465132 SSC5DA1L4H1 1573 aa21.53■■□□□ 1.04
CPSF4-209ENST00000465132 SSH3Q8TE77 659 aa21.53■■□□□ 1.04
CPSF4-209ENST00000465132 SLC10A4Q96EP9 437 aa21.53■■□□□ 1.04
CPSF4-209ENST00000465132 AOX1Q06278 1338 aa21.53■■□□□ 1.04
CPSF4-209ENST00000465132 FAM205AQ6ZU69 1335 aa21.53■■□□□ 1.04
CPSF4-209ENST00000465132 PPP1R12BO60237 982 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-209ENST00000465132 SLC34A2O95436 690 aa21.52■■□□□ 1.04
CPSF4-209ENST00000465132 R3HDMLQ9H3Y0 253 aa21.52■■□□□ 1.04
CPSF4-209ENST00000465132 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-209ENST00000465132 VEZTQ9HBM0 779 aa21.52■■□□□ 1.04
CPSF4-209ENST00000465132 COPRSQ9NQ92 184 aa21.52■■□□□ 1.04
CPSF4-209ENST00000465132 MANSC4A6NHS7 340 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-209ENST00000465132 CIAO1O76071 339 aa21.51■■□□□ 1.03
CPSF4-209ENST00000465132 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-209ENST00000465132 G3BP1Q13283 466 aaKnown RBP eCLIP21.51■■□□□ 1.03
CPSF4-209ENST00000465132 UBE4AQ14139 1066 aa21.51■■□□□ 1.03
CPSF4-209ENST00000465132 SUPT20HL1Q3ZLR7 823 aa21.51■■□□□ 1.03
CPSF4-209ENST00000465132 TDRD7Q8NHU6 1098 aaKnown RBP21.51■■□□□ 1.03
CPSF4-209ENST00000465132 CLMNQ96JQ2 1002 aa21.51■■□□□ 1.03
CPSF4-209ENST00000465132 MROH5Q6ZUA9 1318 aa21.51■■□□□ 1.03
CPSF4-209ENST00000465132 UNCXA6NJT0 531 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 FKTNO75072 461 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 ALDH1A1P00352 501 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 ZBTB48P10074 688 aaPredicted RBP21.5■■□□□ 1.03
CPSF4-209ENST00000465132 GYG1P46976 350 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 RBM5P52756 815 aaKnown RBP eCLIP21.5■■□□□ 1.03
CPSF4-209ENST00000465132 INHBEP58166 350 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 POLA2Q14181 598 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 NBPF12Q5TAG4 269 aaPredicted RBP21.5■■□□□ 1.03
CPSF4-209ENST00000465132 ERC1Q8IUD2 1116 aa21.5■■□□□ 1.03
CPSF4-209ENST00000465132 PUS3Q9BZE2 481 aaKnown RBP21.5■■□□□ 1.03
CPSF4-209ENST00000465132 HIBADHP31937 336 aaKnown RBP21.49■■□□□ 1.03
CPSF4-209ENST00000465132 IL15P40933 162 aaPredicted RBP21.49■■□□□ 1.03
CPSF4-209ENST00000465132 OS9Q13438 667 aaPredicted RBP21.49■■□□□ 1.03
CPSF4-209ENST00000465132 MFSD14BQ5SR56 506 aa21.49■■□□□ 1.03
CPSF4-209ENST00000465132 WNK4Q96J92 1243 aa21.49■■□□□ 1.03
CPSF4-209ENST00000465132 FAM84BQ96KN1 310 aaPredicted RBP21.49■■□□□ 1.03
CPSF4-209ENST00000465132 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
CPSF4-209ENST00000465132 ECM29Q5VYK3 1845 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 PNMA6EA0A0J9YXQ4 647 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 EYA2O00167 538 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 RASA3Q14644 834 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 FBXO46Q6PJ61 603 aaPredicted RBP21.48■■□□□ 1.03
CPSF4-209ENST00000465132 IFNL1Q8IU54 200 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 SERPINA10Q9UK55 444 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
CPSF4-209ENST00000465132 SURF6O75683 361 aaKnown RBP21.47■■□□□ 1.03
CPSF4-209ENST00000465132 IREB2P48200 963 aaKnown RBP21.47■■□□□ 1.03
CPSF4-209ENST00000465132 RFX5P48382 616 aaPredicted RBP21.47■■□□□ 1.03
CPSF4-209ENST00000465132 SPDYE2Q495Y8 402 aa21.47■■□□□ 1.03
CPSF4-209ENST00000465132 ZBTB47Q9UFB7 747 aaPredicted RBP21.47■■□□□ 1.03
CPSF4-209ENST00000465132 TTF2Q9UNY4 1162 aaKnown RBP21.47■■□□□ 1.03
CPSF4-209ENST00000465132 RAB11FIP3O75154 756 aa21.46■■□□□ 1.03
CPSF4-209ENST00000465132 USP2O75604 605 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-209ENST00000465132 HDAC1Q13547 482 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-209ENST00000465132 CEP126Q9P2H0 1117 aa21.46■■□□□ 1.03
CPSF4-209ENST00000465132 ZNF70Q9UC06 446 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-209ENST00000465132 NOP58Q9Y2X3 529 aaKnown RBP21.46■■□□□ 1.03
CPSF4-209ENST00000465132 IGF2BP3O00425 579 aaKnown RBP eCLIP21.45■■□□□ 1.02
CPSF4-209ENST00000465132 TNFAIP1Q13829 316 aa21.45■■□□□ 1.02
CPSF4-209ENST00000465132 GJA5P36382 358 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 METTL24Q5JXM2 366 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 FBXO33Q7Z6M2 555 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 ANKRD13AQ8IZ07 590 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 GCC1Q96CN9 775 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 TDRD3Q9H7E2 651 aaKnown RBP21.44■■□□□ 1.02
CPSF4-209ENST00000465132 AKAP2Q9Y2D5 859 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 PCDHB15Q9Y5E8 787 aa21.44■■□□□ 1.02
CPSF4-209ENST00000465132 CRKP46108 304 aa21.43■■□□□ 1.02
CPSF4-209ENST00000465132 SIL1Q9H173 461 aa21.43■■□□□ 1.02
CPSF4-209ENST00000465132 TNRC18O15417 2968 aaPredicted RBP21.42■■□□□ 1.02
CPSF4-209ENST00000465132 LRRC24Q50LG9 513 aa21.42■■□□□ 1.02
CPSF4-209ENST00000465132 VPS37DQ86XT2 251 aa21.42■■□□□ 1.02
CPSF4-209ENST00000465132 TEPSINQ96N21 525 aa21.42■■□□□ 1.02
CPSF4-209ENST00000465132 IQSEC3Q9UPP2 1182 aaPredicted RBP21.42■■□□□ 1.02
CPSF4-209ENST00000465132 GRIK5Q16478 980 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 OTUD7BQ6GQQ9 843 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 CDAN1Q8IWY9 1227 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 SIRT2Q8IXJ6 389 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 KLHDC4Q8TBB5 520 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 DCTPP1Q9H773 170 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 LAMB1P07942 1786 aa21.41■■□□□ 1.02
CPSF4-209ENST00000465132 PDE4DIPQ5VU43 2346 aa21.4■■□□□ 1.02
CPSF4-209ENST00000465132 TESPA1A2RU30 521 aaPredicted RBP21.4■■□□□ 1.02
CPSF4-209ENST00000465132 TCP10L2B9ZVM9 353 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms