RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 ITGBL1O95965 494 aaPredicted RBP16.75■□□□□ 0.27
LIMD1-203ENST00000465039 APOBEC3FQ8IUX4 373 aaKnown RBP16.75■□□□□ 0.27
LIMD1-203ENST00000465039 GPATCH3Q96I76 525 aa16.75■□□□□ 0.27
LIMD1-203ENST00000465039 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
LIMD1-203ENST00000465039 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
LIMD1-203ENST00000465039 JAG2Q9Y219 1238 aa16.75■□□□□ 0.27
LIMD1-203ENST00000465039 MAP4K4O95819 1239 aaPredicted RBP16.74■□□□□ 0.27
LIMD1-203ENST00000465039 CRKP46108 304 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 SCARF1Q14162 830 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 FKBP1CQ5VVH2 108 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 FAM163AQ96GL9 167 aaPredicted RBP16.74■□□□□ 0.27
LIMD1-203ENST00000465039 GGA3Q9NZ52 723 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
LIMD1-203ENST00000465039 PPP2R3BQ9Y5P8 575 aa16.74■□□□□ 0.27
LIMD1-203ENST00000465039 APBB1O00213 710 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 HSPA6P17066 643 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 ATP5JP18859 108 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 PRDX5P30044 214 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 GSTO1P78417 241 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 TNFAIP1Q13829 316 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 TTF1Q15361 905 aaPredicted RBP16.73■□□□□ 0.27
LIMD1-203ENST00000465039 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
LIMD1-203ENST00000465039 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
LIMD1-203ENST00000465039 GAKO14976 1311 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 TRPM7Q96QT4 1865 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 F8W031 263 aaPredicted RBP16.72■□□□□ 0.27
LIMD1-203ENST00000465039 NBPF9Q3BBW0 867 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 RBM26Q5T8P6 1007 aaKnown RBP16.72■□□□□ 0.27
LIMD1-203ENST00000465039 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 KRT26Q7Z3Y9 468 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
LIMD1-203ENST00000465039 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
LIMD1-203ENST00000465039 LDHCP07864 332 aa16.71■□□□□ 0.27
LIMD1-203ENST00000465039 APLP1P51693 650 aa16.71■□□□□ 0.27
LIMD1-203ENST00000465039 GRIK5Q16478 980 aa16.71■□□□□ 0.27
LIMD1-203ENST00000465039 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
LIMD1-203ENST00000465039 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
LIMD1-203ENST00000465039 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
LIMD1-203ENST00000465039 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
LIMD1-203ENST00000465039 RBM5P52756 815 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIMD1-203ENST00000465039 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
LIMD1-203ENST00000465039 PRMT6Q96LA8 375 aaPredicted RBP16.7■□□□□ 0.26
LIMD1-203ENST00000465039 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
LIMD1-203ENST00000465039 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
LIMD1-203ENST00000465039 MYH2Q9UKX2 1941 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 ERC2O15083 957 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 APOBEC3HQ6NTF7 200 aaKnown RBP16.69■□□□□ 0.26
LIMD1-203ENST00000465039 NSUN4Q96CB9 384 aaKnown RBP16.69■□□□□ 0.26
LIMD1-203ENST00000465039 HAUS7Q99871 368 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 DAGLAQ9Y4D2 1042 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
LIMD1-203ENST00000465039 NEFLP07196 543 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 ZAP70P43403 619 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 FKBP1BP68106 108 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 MECOMQ03112 1051 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 TICAM2Q86XR7 235 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 GLIS2Q9BZE0 524 aaPredicted RBP16.68■□□□□ 0.26
LIMD1-203ENST00000465039 AOX1Q06278 1338 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
LIMD1-203ENST00000465039 POLR2AP24928 1970 aaKnown RBP16.68■□□□□ 0.26
LIMD1-203ENST00000465039 GPR75-ASB3A0A0A6YYF3 556 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 TMEM88BA6NKF7 163 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
LIMD1-203ENST00000465039 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
LIMD1-203ENST00000465039 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
LIMD1-203ENST00000465039 MX1P20591 662 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 TNNI2P48788 182 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 NUCB1Q02818 461 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 DIXDC1Q155Q3 683 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 ERICH6BQ5W0A0 696 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 ZNF70Q9UC06 446 aaPredicted RBP16.67■□□□□ 0.26
LIMD1-203ENST00000465039 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
LIMD1-203ENST00000465039 ASTN2O75129 1339 aaPredicted RBP16.67■□□□□ 0.26
LIMD1-203ENST00000465039 RFX7Q2KHR2 1363 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 IGHDP01880 384 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 PLCG2P16885 1265 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
LIMD1-203ENST00000465039 COL2A1P02458 1487 aaPredicted RBP16.66■□□□□ 0.26
LIMD1-203ENST00000465039 NF2P35240 595 aa16.65■□□□□ 0.26
LIMD1-203ENST00000465039 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
LIMD1-203ENST00000465039 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
LIMD1-203ENST00000465039 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
LIMD1-203ENST00000465039 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
LIMD1-203ENST00000465039 ZNF384Q8TF68 577 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms