RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 EAF2Q96CJ1 260 aaPredicted RBP20.94■□□□□ 0.94
VPS52-215ENST00000464425 CCDC8Q9H0W5 538 aaPredicted RBP20.94■□□□□ 0.94
VPS52-215ENST00000464425 APOBEC3FQ8IUX4 373 aaKnown RBP20.93■□□□□ 0.94
VPS52-215ENST00000464425 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
VPS52-215ENST00000464425 TEKT1Q969V4 418 aa20.93■□□□□ 0.94
VPS52-215ENST00000464425 TDRD3Q9H7E2 651 aaKnown RBP20.93■□□□□ 0.94
VPS52-215ENST00000464425 VEZTQ9HBM0 779 aa20.93■□□□□ 0.94
VPS52-215ENST00000464425 IL1RAPL2Q9NP60 686 aa20.93■□□□□ 0.94
VPS52-215ENST00000464425 HMG20BQ9P0W2 317 aa20.93■□□□□ 0.94
VPS52-215ENST00000464425 ARAP2Q8WZ64 1704 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 TRPM7Q96QT4 1865 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 LDHBP07195 334 aaKnown RBP20.92■□□□□ 0.94
VPS52-215ENST00000464425 PRDX5P30044 214 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 HDLBPQ00341 1268 aaKnown RBP20.92■□□□□ 0.94
VPS52-215ENST00000464425 DEFB115Q30KQ5 88 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 CCDC158Q5M9N0 1113 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 TTC39AQ5SRH9 613 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 PI16Q6UXB8 463 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 PAXIP1Q6ZW49 1069 aaPredicted RBP20.92■□□□□ 0.94
VPS52-215ENST00000464425 TLR7Q9NYK1 1049 aaKnown RBP20.92■□□□□ 0.94
VPS52-215ENST00000464425 ABCF2Q9UG63 623 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 DBNLQ9UJU6 430 aaKnown RBP20.92■□□□□ 0.94
VPS52-215ENST00000464425 TLL2Q9Y6L7 1015 aa20.92■□□□□ 0.94
VPS52-215ENST00000464425 RASSF10A6NK89 507 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 ZBTB22O15209 634 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 MAST3O60307 1309 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 UQCRFS1P1P0C7P4 283 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 ARID4AP29374 1257 aaPredicted RBP20.91■□□□□ 0.94
VPS52-215ENST00000464425 CNTNAP1P78357 1384 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 SAPCD2Q86UD0 394 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 AACSQ86V21 672 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 SPATA5Q8NB90 893 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 GBA2Q9HCG7 927 aaPredicted RBP20.91■□□□□ 0.94
VPS52-215ENST00000464425 SALL1Q9NSC2 1324 aa20.91■□□□□ 0.94
VPS52-215ENST00000464425 ZNF70Q9UC06 446 aaPredicted RBP20.91■□□□□ 0.94
VPS52-215ENST00000464425 MYH13Q9UKX3 1938 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 MCAMP43121 646 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 VEGFBP49765 207 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 DIXDC1Q155Q3 683 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 TBC1D9Q6ZT07 1266 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 ZGPATQ8N5A5 531 aaKnown RBP20.9■□□□□ 0.94
VPS52-215ENST00000464425 C2orf69Q8N8R5 385 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 KIF1BPQ96EK5 621 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 MRIQ9BWK5 157 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 DEFB129Q9H1M3 183 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 SNRKQ9NRH2 765 aa20.9■□□□□ 0.94
VPS52-215ENST00000464425 PDS5AQ29RF7 1337 aaKnown RBP20.89■□□□□ 0.93
VPS52-215ENST00000464425 RAB11FIP3O75154 756 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 GRM1Q13255 1194 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 SPDYE2Q495Y8 402 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 APOBEC3HQ6NTF7 200 aaKnown RBP20.89■□□□□ 0.93
VPS52-215ENST00000464425 HHIPL2Q6UWX4 724 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 EXOC6Q8TAG9 804 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 ZDHHC15Q96MV8 337 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 PCDHB15Q9Y5E8 787 aa20.89■□□□□ 0.93
VPS52-215ENST00000464425 HUNKP57058 714 aa20.88■□□□□ 0.93
VPS52-215ENST00000464425 TCP10L2B9ZVM9 353 aa20.87■□□□□ 0.93
VPS52-215ENST00000464425 RASA3Q14644 834 aa20.87■□□□□ 0.93
VPS52-215ENST00000464425 SPTY2D1Q68D10 685 aaPredicted RBP20.87■□□□□ 0.93
VPS52-215ENST00000464425 CYP4F22Q6NT55 531 aa20.87■□□□□ 0.93
VPS52-215ENST00000464425 ERICH6Q7L0X2 663 aa20.87■□□□□ 0.93
VPS52-215ENST00000464425 DZIP1Q86YF9 867 aaKnown RBP20.87■□□□□ 0.93
VPS52-215ENST00000464425 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
VPS52-215ENST00000464425 DAGLAQ9Y4D2 1042 aa20.87■□□□□ 0.93
VPS52-215ENST00000464425 CACNB3P54284 484 aa20.86■□□□□ 0.93
VPS52-215ENST00000464425 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
VPS52-215ENST00000464425 TTLL12Q14166 644 aaPredicted RBP20.86■□□□□ 0.93
VPS52-215ENST00000464425 MOB2Q70IA6 237 aa20.86■□□□□ 0.93
VPS52-215ENST00000464425 JMYQ8N9B5 988 aa20.86■□□□□ 0.93
VPS52-215ENST00000464425 WDR33Q9C0J8 1336 aaKnown RBP20.85■□□□□ 0.93
VPS52-215ENST00000464425 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
VPS52-215ENST00000464425 NF2P35240 595 aa20.85■□□□□ 0.93
VPS52-215ENST00000464425 PRKG1Q13976 671 aa20.85■□□□□ 0.93
VPS52-215ENST00000464425 ZNF512BQ96KM6 892 aaPredicted RBP20.85■□□□□ 0.93
VPS52-215ENST00000464425 CAPNS2Q96L46 248 aa20.85■□□□□ 0.93
VPS52-215ENST00000464425 RAI14Q9P0K7 980 aa20.85■□□□□ 0.93
VPS52-215ENST00000464425 SMARCA5O60264 1052 aaPredicted RBP20.84■□□□□ 0.93
VPS52-215ENST00000464425 MECOMQ03112 1051 aa20.84■□□□□ 0.93
VPS52-215ENST00000464425 TNFAIP1Q13829 316 aa20.84■□□□□ 0.93
VPS52-215ENST00000464425 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
VPS52-215ENST00000464425 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
VPS52-215ENST00000464425 PCNTO95613 3336 aa20.84■□□□□ 0.93
VPS52-215ENST00000464425 UBE2Q2LH0YL09 131 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 ECE1P42892 770 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 ZAP70P43403 619 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 NBPF12Q5TAG4 269 aaPredicted RBP20.83■□□□□ 0.93
VPS52-215ENST00000464425 CDC42EP5Q6NZY7 148 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 HHIPL1Q96JK4 782 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 LRRCC1Q9C099 1032 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 DCTPP1Q9H773 170 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 FZD1Q9UP38 647 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 PPP2R3BQ9Y5P8 575 aa20.83■□□□□ 0.93
VPS52-215ENST00000464425 CYP2E1P05181 493 aaPredicted RBP20.82■□□□□ 0.92
VPS52-215ENST00000464425 TNNI2P48788 182 aa20.82■□□□□ 0.92
VPS52-215ENST00000464425 FKBP1BP68106 108 aa20.82■□□□□ 0.92
VPS52-215ENST00000464425 SLF2Q8IX21 1173 aa20.82■□□□□ 0.92
VPS52-215ENST00000464425 TMEM39BQ9GZU3 492 aa20.82■□□□□ 0.92
VPS52-215ENST00000464425 USP40Q9NVE5 1235 aa20.82■□□□□ 0.92
VPS52-215ENST00000464425 NDUFB9Q9Y6M9 179 aa20.82■□□□□ 0.92
VPS52-215ENST00000464425 ECM29Q5VYK3 1845 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms