RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 TDRD3Q9H7E2 651 aaKnown RBP21.88■■□□□ 1.09
COL5A1-204ENST00000463925 ZBTB48P10074 688 aaPredicted RBP21.87■■□□□ 1.09
COL5A1-204ENST00000463925 RARSP54136 660 aaKnown RBP21.87■■□□□ 1.09
COL5A1-204ENST00000463925 GRIK5Q16478 980 aa21.87■■□□□ 1.09
COL5A1-204ENST00000463925 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
COL5A1-204ENST00000463925 CTU1Q7Z7A3 348 aaKnown RBP21.87■■□□□ 1.09
COL5A1-204ENST00000463925 LPIN2Q92539 896 aa21.87■■□□□ 1.09
COL5A1-204ENST00000463925 SLC10A4Q96EP9 437 aa21.87■■□□□ 1.09
COL5A1-204ENST00000463925 HDAC5Q9UQL6 1122 aa21.87■■□□□ 1.09
COL5A1-204ENST00000463925 SUGT1Q9Y2Z0 365 aa21.87■■□□□ 1.09
COL5A1-204ENST00000463925 MANSC4A6NHS7 340 aaPredicted RBP21.86■■□□□ 1.09
COL5A1-204ENST00000463925 CIAO1O76071 339 aa21.86■■□□□ 1.09
COL5A1-204ENST00000463925 TBC1D8O95759 1140 aa21.86■■□□□ 1.09
COL5A1-204ENST00000463925 SLC5A1P13866 664 aa21.86■■□□□ 1.09
COL5A1-204ENST00000463925 IREB2P48200 963 aaKnown RBP21.86■■□□□ 1.09
COL5A1-204ENST00000463925 RGS19P49795 217 aa21.86■■□□□ 1.09
COL5A1-204ENST00000463925 CLMNQ96JQ2 1002 aa21.86■■□□□ 1.09
COL5A1-204ENST00000463925 MAST3O60307 1309 aa21.85■■□□□ 1.09
COL5A1-204ENST00000463925 USP2O75604 605 aaPredicted RBP21.85■■□□□ 1.09
COL5A1-204ENST00000463925 ARHGAP45Q92619 1136 aa21.85■■□□□ 1.09
COL5A1-204ENST00000463925 TEKT1Q969V4 418 aa21.85■■□□□ 1.09
COL5A1-204ENST00000463925 WNK4Q96J92 1243 aa21.85■■□□□ 1.09
COL5A1-204ENST00000463925 TEPSINQ96N21 525 aa21.85■■□□□ 1.09
COL5A1-204ENST00000463925 MRIQ9BWK5 157 aa21.85■■□□□ 1.09
COL5A1-204ENST00000463925 ALDH1A1P00352 501 aa21.84■■□□□ 1.09
COL5A1-204ENST00000463925 TNNI2P48788 182 aa21.84■■□□□ 1.09
COL5A1-204ENST00000463925 INHBEP58166 350 aa21.84■■□□□ 1.09
COL5A1-204ENST00000463925 ANKRD13AQ8IZ07 590 aa21.84■■□□□ 1.09
COL5A1-204ENST00000463925 ZNF296Q8WUU4 475 aaPredicted RBP21.84■■□□□ 1.09
COL5A1-204ENST00000463925 LRRFIP2Q9Y608 721 aaKnown RBP21.84■■□□□ 1.09
COL5A1-204ENST00000463925 OTOFQ9HC10 1997 aa21.84■■□□□ 1.09
COL5A1-204ENST00000463925 MYH13Q9UKX3 1938 aa21.83■■□□□ 1.09
COL5A1-204ENST00000463925 GPR25O00155 361 aa21.83■■□□□ 1.09
COL5A1-204ENST00000463925 ZDHHC15Q96MV8 337 aa21.83■■□□□ 1.09
COL5A1-204ENST00000463925 TCP10L2B9ZVM9 353 aa21.82■■□□□ 1.08
COL5A1-204ENST00000463925 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
COL5A1-204ENST00000463925 WDR66Q8TBY9 1149 aa21.82■■□□□ 1.08
COL5A1-204ENST00000463925 MEIS3Q99687 375 aa21.82■■□□□ 1.08
COL5A1-204ENST00000463925 SIL1Q9H173 461 aa21.82■■□□□ 1.08
COL5A1-204ENST00000463925 ATP2B3Q16720 1220 aa21.81■■□□□ 1.08
COL5A1-204ENST00000463925 IFNL1Q8IU54 200 aa21.81■■□□□ 1.08
COL5A1-204ENST00000463925 CDAN1Q8IWY9 1227 aa21.81■■□□□ 1.08
COL5A1-204ENST00000463925 TMEM39BQ9GZU3 492 aa21.81■■□□□ 1.08
COL5A1-204ENST00000463925 CEP126Q9P2H0 1117 aa21.81■■□□□ 1.08
COL5A1-204ENST00000463925 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
COL5A1-204ENST00000463925 PKN2Q16513 984 aaKnown RBP21.8■■□□□ 1.08
COL5A1-204ENST00000463925 HHIPL2Q6UWX4 724 aa21.8■■□□□ 1.08
COL5A1-204ENST00000463925 COPRSQ9NQ92 184 aa21.8■■□□□ 1.08
COL5A1-204ENST00000463925 TMOD2Q9NZR1 351 aa21.8■■□□□ 1.08
COL5A1-204ENST00000463925 ZBTB22O15209 634 aa21.79■■□□□ 1.08
COL5A1-204ENST00000463925 GJA5P36382 358 aa21.79■■□□□ 1.08
COL5A1-204ENST00000463925 MLLT1Q03111 559 aaPredicted RBP21.79■■□□□ 1.08
COL5A1-204ENST00000463925 FKBP1CQ5VVH2 108 aa21.79■■□□□ 1.08
COL5A1-204ENST00000463925 APOBEC3HQ6NTF7 200 aaKnown RBP21.79■■□□□ 1.08
COL5A1-204ENST00000463925 RPAP1Q9BWH6 1393 aaPredicted RBP21.78■■□□□ 1.08
COL5A1-204ENST00000463925 IGF2BP3O00425 579 aaKnown RBP eCLIP21.78■■□□□ 1.08
COL5A1-204ENST00000463925 GNAI3P08754 354 aa21.78■■□□□ 1.08
COL5A1-204ENST00000463925 FAM83AQ86UY5 434 aa21.78■■□□□ 1.08
COL5A1-204ENST00000463925 R3HDMLQ9H3Y0 253 aa21.78■■□□□ 1.08
COL5A1-204ENST00000463925 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
COL5A1-204ENST00000463925 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
COL5A1-204ENST00000463925 FKTNO75072 461 aa21.77■■□□□ 1.08
COL5A1-204ENST00000463925 CACNB3P54284 484 aa21.77■■□□□ 1.08
COL5A1-204ENST00000463925 MTX1Q13505 466 aa21.77■■□□□ 1.08
COL5A1-204ENST00000463925 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
COL5A1-204ENST00000463925 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.77■■□□□ 1.08
COL5A1-204ENST00000463925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.77■■□□□ 1.08
COL5A1-204ENST00000463925 GNL3LQ9NVN8 582 aaKnown RBP21.77■■□□□ 1.08
COL5A1-204ENST00000463925 TESPA1A2RU30 521 aaPredicted RBP21.76■■□□□ 1.07
COL5A1-204ENST00000463925 SEMA3EO15041 775 aa21.76■■□□□ 1.07
COL5A1-204ENST00000463925 IPO8O15397 1037 aaKnown RBP21.76■■□□□ 1.07
COL5A1-204ENST00000463925 MAP3K9P80192 1104 aa21.76■■□□□ 1.07
COL5A1-204ENST00000463925 OPTNQ96CV9 577 aa21.76■■□□□ 1.07
COL5A1-204ENST00000463925 ELP3Q9H9T3 547 aa21.76■■□□□ 1.07
COL5A1-204ENST00000463925 SALL1Q9NSC2 1324 aa21.76■■□□□ 1.07
COL5A1-204ENST00000463925 TRIM27P14373 513 aa21.75■■□□□ 1.07
COL5A1-204ENST00000463925 VGLL4Q14135 290 aa21.75■■□□□ 1.07
COL5A1-204ENST00000463925 OTUD7BQ6GQQ9 843 aa21.75■■□□□ 1.07
COL5A1-204ENST00000463925 HOOK2Q96ED9 719 aa21.75■■□□□ 1.07
COL5A1-204ENST00000463925 HPS5Q9UPZ3 1129 aa21.75■■□□□ 1.07
COL5A1-204ENST00000463925 PRDX5P30044 214 aa21.74■■□□□ 1.07
COL5A1-204ENST00000463925 PHKA1P46020 1223 aa21.74■■□□□ 1.07
COL5A1-204ENST00000463925 ATF7IPQ6VMQ6 1270 aa21.74■■□□□ 1.07
COL5A1-204ENST00000463925 DENND2AQ9ULE3 1009 aa21.74■■□□□ 1.07
COL5A1-204ENST00000463925 DAGLAQ9Y4D2 1042 aa21.74■■□□□ 1.07
COL5A1-204ENST00000463925 CSADQ9Y600 493 aa21.74■■□□□ 1.07
COL5A1-204ENST00000463925 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
COL5A1-204ENST00000463925 FBXO46Q6PJ61 603 aaPredicted RBP21.73■■□□□ 1.07
COL5A1-204ENST00000463925 MS4A4AQ96JQ5 239 aa21.73■■□□□ 1.07
COL5A1-204ENST00000463925 LDHBP07195 334 aaKnown RBP21.72■■□□□ 1.07
COL5A1-204ENST00000463925 DIXDC1Q155Q3 683 aa21.72■■□□□ 1.07
COL5A1-204ENST00000463925 CCDC102BQ68D86 513 aa21.72■■□□□ 1.07
COL5A1-204ENST00000463925 PTPN18Q99952 460 aa21.72■■□□□ 1.07
COL5A1-204ENST00000463925 SPDYE5A6NIY4 337 aa21.71■■□□□ 1.07
COL5A1-204ENST00000463925 BCAR3O75815 825 aa21.71■■□□□ 1.07
COL5A1-204ENST00000463925 ADORA1P30542 326 aa21.71■■□□□ 1.07
COL5A1-204ENST00000463925 CRHR2Q13324 411 aa21.71■■□□□ 1.07
COL5A1-204ENST00000463925 DCAF15Q66K64 600 aa21.71■■□□□ 1.07
COL5A1-204ENST00000463925 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
COL5A1-204ENST00000463925 PDS5AQ29RF7 1337 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms