RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SAMD9LQ8IVG5 1584 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 LINC01387J3KSC0 135 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 DYRK3O43781 588 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 ZNF211Q13398 564 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-204ENST00000463622 SETDB1Q15047 1291 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 DTWD1Q8N5C7 304 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 WFDC12Q8WWY7 111 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 TP53INP1Q96A56 240 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 POLIQ9UNA4 740 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 MROH2AA6NES4 1674 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 GPATCH8Q9UKJ3 1502 aaKnown RBP5.68□□□□□ -1.5
SCFD1-204ENST00000463622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCFD1-204ENST00000463622 MIA2Q96PC5 1412 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 DLL1O00548 723 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 NOS3P29474 1203 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 IGF2-ASQ6U949 168 aa5.68□□□□□ -1.5
SCFD1-204ENST00000463622 SH2B1Q9NRF2 756 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-204ENST00000463622 CFDP1Q9UEE9 299 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-204ENST00000463622 DHX29Q7Z478 1369 aaKnown RBP5.67□□□□□ -1.5
SCFD1-204ENST00000463622 VWDEQ8N2E2 1590 aa5.67□□□□□ -1.5
SCFD1-204ENST00000463622 NPHP4O75161 1426 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-204ENST00000463622 PDE12Q6L8Q7 609 aaKnown RBP5.67□□□□□ -1.5
SCFD1-204ENST00000463622 CEP120Q8N960 986 aa5.67□□□□□ -1.5
SCFD1-204ENST00000463622 CASKIN1Q8WXD9 1431 aa5.67□□□□□ -1.5
SCFD1-204ENST00000463622 LRRC7Q96NW7 1537 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 DNMT1P26358 1616 aaKnown RBP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 KIF4AO95239 1232 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 MZF1P28698 734 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 AGGF1Q8N302 714 aaeCLIP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 GALNT11Q8NCW6 608 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 MEGF10Q96KG7 1140 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 HHIPQ96QV1 700 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 CARD10Q9BWT7 1032 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 PPME1Q9Y570 386 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 PLXNC1O60486 1568 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 NEURL4Q96JN8 1562 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 ZNF142P52746 1687 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 FAM135BQ49AJ0 1406 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 CDC42BPBQ9Y5S2 1711 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 PLEKHH2Q8IVE3 1493 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 KIF3BO15066 747 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 SMNDC1O75940 238 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 CES1P23141 567 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 PRSS36Q5K4E3 855 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 TTC16Q8NEE8 873 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 POP1Q99575 1024 aaKnown RBP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-204ENST00000463622 PBX4Q9BYU1 374 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 CCDC87Q9NVE4 849 aa5.66□□□□□ -1.5
SCFD1-204ENST00000463622 MYO3AQ8NEV4 1616 aa5.65□□□□□ -1.5
SCFD1-204ENST00000463622 RTEL1-TNFRSF6BF6WH68 1400 aa5.65□□□□□ -1.5
SCFD1-204ENST00000463622 ZNF644Q9H582 1327 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-204ENST00000463622 WASHC2CQ9Y4E1 1318 aa5.65□□□□□ -1.5
SCFD1-204ENST00000463622 PZPP20742 1482 aa5.65□□□□□ -1.5
SCFD1-204ENST00000463622 PCSK2P16519 638 aa5.65□□□□□ -1.51
SCFD1-204ENST00000463622 FOXD4L6Q3SYB3 417 aaPredicted RBP5.65□□□□□ -1.51
SCFD1-204ENST00000463622 FOXD4L3Q6VB84 417 aaPredicted RBP5.65□□□□□ -1.51
SCFD1-204ENST00000463622 CHRDQ9H2X0 955 aa5.65□□□□□ -1.51
SCFD1-204ENST00000463622 SALL4Q9UJQ4 1053 aa5.65□□□□□ -1.51
SCFD1-204ENST00000463622 NLRP1Q9C000 1473 aa5.65□□□□□ -1.51
SCFD1-204ENST00000463622 MBD5Q9P267 1494 aa5.65□□□□□ -1.51
SCFD1-204ENST00000463622 EPHA1P21709 976 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 CDC27P30260 824 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 FKBP4Q02790 459 aaKnown RBP eCLIP5.64□□□□□ -1.51
SCFD1-204ENST00000463622 ZMYM1Q5SVZ6 1142 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 Q8N3U1 123 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 KCNK4Q9NYG8 393 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 FOXD3Q9UJU5 478 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-204ENST00000463622 ATP7AQ04656 1500 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 CCDC18Q5T9S5 1454 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 PREX2Q70Z35 1606 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 ITSN2Q9NZM3 1697 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 EREGO14944 169 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 DDX3YO15523 660 aaKnown RBP5.64□□□□□ -1.51
SCFD1-204ENST00000463622 FZD6O60353 706 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 WISP1O95388 367 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 LTKP29376 864 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 SERPINB4P48594 390 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 XP32Q5T750 250 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 ALKBH2Q6NS38 261 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 XKR5Q6UX68 686 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 AKTIPQ9H8T0 292 aa5.64□□□□□ -1.51
SCFD1-204ENST00000463622 SYCP2Q9BX26 1530 aa5.63□□□□□ -1.51
SCFD1-204ENST00000463622 FAM13AO94988 1023 aa5.63□□□□□ -1.51
SCFD1-204ENST00000463622 NPR3P17342 541 aa5.63□□□□□ -1.51
SCFD1-204ENST00000463622 LRRIQ1Q96JM4 1722 aa5.63□□□□□ -1.51
SCFD1-204ENST00000463622 FAM135AQ9P2D6 1515 aa5.63□□□□□ -1.51
SCFD1-204ENST00000463622 CCNB3Q8WWL7 1395 aa5.63□□□□□ -1.51
SCFD1-204ENST00000463622 VPS8Q8N3P4 1428 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 F8W735 103 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-204ENST00000463622 NFKBIEO00221 500 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 TNFRSF21O75509 655 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 RPLP1P05386 114 aaKnown RBP5.62□□□□□ -1.51
SCFD1-204ENST00000463622 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
SCFD1-204ENST00000463622 DZANK1Q9NVP4 752 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 CLTCQ00610 1675 aaKnown RBP5.62□□□□□ -1.51
SCFD1-204ENST00000463622 DEPDC5O75140 1603 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 FSCN2O14926 492 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 CD68P34810 354 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-204ENST00000463622 HGSNATQ68CP4 663 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms