RNA–Protein interactions for RNA: ENST00000463584.1

PFDN6-206, Transcript of prefoldin subunit 6, humanhuman

TSL 3 BASIC

Gene PFDN6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-206ENST00000463584 ZBTB48P10074 688 aaPredicted RBP23.1■■□□□ 1.29
PFDN6-206ENST00000463584 USP44Q9H0E7 712 aa23.1■■□□□ 1.29
PFDN6-206ENST00000463584 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
PFDN6-206ENST00000463584 LAMB1P07942 1786 aa23.09■■□□□ 1.29
PFDN6-206ENST00000463584 MANSC4A6NHS7 340 aaPredicted RBP23.09■■□□□ 1.29
PFDN6-206ENST00000463584 GPR25O00155 361 aa23.09■■□□□ 1.29
PFDN6-206ENST00000463584 PDE8BO95263 885 aa23.09■■□□□ 1.29
PFDN6-206ENST00000463584 CHAF1AQ13111 956 aaPredicted RBP23.09■■□□□ 1.29
PFDN6-206ENST00000463584 ALDH1L2Q3SY69 923 aa23.09■■□□□ 1.29
PFDN6-206ENST00000463584 NOM1Q5C9Z4 860 aaKnown RBP23.09■■□□□ 1.29
PFDN6-206ENST00000463584 KLHDC4Q8TBB5 520 aa23.09■■□□□ 1.29
PFDN6-206ENST00000463584 TDRD3Q9H7E2 651 aaKnown RBP23.09■■□□□ 1.29
PFDN6-206ENST00000463584 ZNF70Q9UC06 446 aaPredicted RBP23.09■■□□□ 1.29
PFDN6-206ENST00000463584 UNCXA6NJT0 531 aa23.08■■□□□ 1.29
PFDN6-206ENST00000463584 ALDH1A1P00352 501 aa23.08■■□□□ 1.29
PFDN6-206ENST00000463584 FBXO33Q7Z6M2 555 aa23.08■■□□□ 1.29
PFDN6-206ENST00000463584 DZIP1LQ8IYY4 767 aaKnown RBP23.08■■□□□ 1.29
PFDN6-206ENST00000463584 VGLL2Q8N8G2 317 aa23.08■■□□□ 1.29
PFDN6-206ENST00000463584 WNK4Q96J92 1243 aa23.08■■□□□ 1.29
PFDN6-206ENST00000463584 OTOFQ9HC10 1997 aa23.08■■□□□ 1.29
PFDN6-206ENST00000463584 CRKP46108 304 aa23.08■■□□□ 1.28
PFDN6-206ENST00000463584 PKN2Q16513 984 aaKnown RBP23.08■■□□□ 1.28
PFDN6-206ENST00000463584 TBC1D22AQ8WUA7 517 aa23.08■■□□□ 1.28
PFDN6-206ENST00000463584 CFHR5Q9BXR6 569 aa23.08■■□□□ 1.28
PFDN6-206ENST00000463584 SOX10P56693 466 aa23.07■■□□□ 1.28
PFDN6-206ENST00000463584 INHBEP58166 350 aa23.07■■□□□ 1.28
PFDN6-206ENST00000463584 CDCA7LQ96GN5 454 aa23.07■■□□□ 1.28
PFDN6-206ENST00000463584 PUM3Q15397 648 aaKnown RBP23.06■■□□□ 1.28
PFDN6-206ENST00000463584 ANKRD13AQ8IZ07 590 aa23.06■■□□□ 1.28
PFDN6-206ENST00000463584 HPS5Q9UPZ3 1129 aa23.06■■□□□ 1.28
PFDN6-206ENST00000463584 FKTNO75072 461 aa23.05■■□□□ 1.28
PFDN6-206ENST00000463584 USP2O75604 605 aaPredicted RBP23.05■■□□□ 1.28
PFDN6-206ENST00000463584 TNNI2P48788 182 aa23.05■■□□□ 1.28
PFDN6-206ENST00000463584 IFNL1Q8IU54 200 aa23.05■■□□□ 1.28
PFDN6-206ENST00000463584 MYH13Q9UKX3 1938 aa23.05■■□□□ 1.28
PFDN6-206ENST00000463584 TCP10L2B9ZVM9 353 aa23.04■■□□□ 1.28
PFDN6-206ENST00000463584 IFIT1P09914 478 aaKnown RBP23.04■■□□□ 1.28
PFDN6-206ENST00000463584 BCAMP50895 628 aa23.04■■□□□ 1.28
PFDN6-206ENST00000463584 GRIK5Q16478 980 aa23.04■■□□□ 1.28
PFDN6-206ENST00000463584 TEKT1Q969V4 418 aa23.04■■□□□ 1.28
PFDN6-206ENST00000463584 R3HDMLQ9H3Y0 253 aa23.04■■□□□ 1.28
PFDN6-206ENST00000463584 KIF16BQ96L93 1317 aa23.03■■□□□ 1.28
PFDN6-206ENST00000463584 TNRC18O15417 2968 aaPredicted RBP23.03■■□□□ 1.28
PFDN6-206ENST00000463584 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
PFDN6-206ENST00000463584 EYA2O00167 538 aa23.02■■□□□ 1.28
PFDN6-206ENST00000463584 TMEM39BQ9GZU3 492 aa23.02■■□□□ 1.28
PFDN6-206ENST00000463584 CDAN1Q8IWY9 1227 aa23.02■■□□□ 1.28
PFDN6-206ENST00000463584 TEPSINQ96N21 525 aa23.02■■□□□ 1.28
PFDN6-206ENST00000463584 MAST3O60307 1309 aa23.01■■□□□ 1.27
PFDN6-206ENST00000463584 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.27
PFDN6-206ENST00000463584 UBTFL1P0CB47 393 aaPredicted RBP23.01■■□□□ 1.27
PFDN6-206ENST00000463584 SLC5A1P13866 664 aa23.01■■□□□ 1.27
PFDN6-206ENST00000463584 ELP3Q9H9T3 547 aa23.01■■□□□ 1.27
PFDN6-206ENST00000463584 CT47B1P0C2W7 299 aaPredicted RBP23■■□□□ 1.27
PFDN6-206ENST00000463584 FGFR2P21802 821 aa23■■□□□ 1.27
PFDN6-206ENST00000463584 RFX5P48382 616 aaPredicted RBP23■■□□□ 1.27
PFDN6-206ENST00000463584 OTUD7BQ6GQQ9 843 aa23■■□□□ 1.27
PFDN6-206ENST00000463584 FBXO46Q6PJ61 603 aaPredicted RBP23■■□□□ 1.27
PFDN6-206ENST00000463584 TMOD2Q9NZR1 351 aa23■■□□□ 1.27
PFDN6-206ENST00000463584 GJA5P36382 358 aa23■■□□□ 1.27
PFDN6-206ENST00000463584 OPTNQ96CV9 577 aa23■■□□□ 1.27
PFDN6-206ENST00000463584 TRMT2AQ8IZ69 625 aaKnown RBP22.99■■□□□ 1.27
PFDN6-206ENST00000463584 LPIN2Q92539 896 aa22.99■■□□□ 1.27
PFDN6-206ENST00000463584 SUGT1Q9Y2Z0 365 aa22.99■■□□□ 1.27
PFDN6-206ENST00000463584 CACNB3P54284 484 aa22.98■■□□□ 1.27
PFDN6-206ENST00000463584 ZDHHC15Q96MV8 337 aa22.98■■□□□ 1.27
PFDN6-206ENST00000463584 PDE4DIPQ5VU43 2346 aa22.98■■□□□ 1.27
PFDN6-206ENST00000463584 SIL1Q9H173 461 aa22.98■■□□□ 1.27
PFDN6-206ENST00000463584 NOB1Q9ULX3 412 aaKnown RBP22.98■■□□□ 1.27
PFDN6-206ENST00000463584 CSADQ9Y600 493 aa22.98■■□□□ 1.27
PFDN6-206ENST00000463584 API5Q9BZZ5 524 aaKnown RBP22.97■■□□□ 1.27
PFDN6-206ENST00000463584 VGLL4Q14135 290 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.96■■□□□ 1.27
PFDN6-206ENST00000463584 ATG9AQ7Z3C6 839 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 WDR66Q8TBY9 1149 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 MRIQ9BWK5 157 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 RTN4Q9NQC3 1192 aaKnown RBP22.96■■□□□ 1.27
PFDN6-206ENST00000463584 CRHR2Q13324 411 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 ZMYND15Q9H091 742 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 FBXO3Q9UK99 471 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 HDAC5Q9UQL6 1122 aa22.96■■□□□ 1.27
PFDN6-206ENST00000463584 MAP3K9P80192 1104 aa22.95■■□□□ 1.26
PFDN6-206ENST00000463584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.95■■□□□ 1.262e-8■■□□□ 14.5
PFDN6-206ENST00000463584 TRIM17Q9Y577 477 aa22.95■■□□□ 1.26
PFDN6-206ENST00000463584 TESPA1A2RU30 521 aaPredicted RBP22.94■■□□□ 1.26
PFDN6-206ENST00000463584 CIAO1O76071 339 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 ATP2B3Q16720 1220 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 APOBEC3HQ6NTF7 200 aaKnown RBP22.94■■□□□ 1.26
PFDN6-206ENST00000463584 HHIPL2Q6UWX4 724 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 CEP126Q9P2H0 1117 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 LRRFIP2Q9Y608 721 aaKnown RBP22.94■■□□□ 1.26
PFDN6-206ENST00000463584 FKBP1CQ5VVH2 108 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 FAM83AQ86UY5 434 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 CNKSR2Q8WXI2 1034 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 HOOK2Q96ED9 719 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 PTPN18Q99952 460 aa22.94■■□□□ 1.26
PFDN6-206ENST00000463584 OTUD5Q96G74 571 aa22.93■■□□□ 1.26
PFDN6-206ENST00000463584 ERO1AQ96HE7 468 aa22.93■■□□□ 1.26
PFDN6-206ENST00000463584 GNL3LQ9NVN8 582 aaKnown RBP22.93■■□□□ 1.26
PFDN6-206ENST00000463584 HTTP42858 3142 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms