RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 PATL2C9JE40 543 aaKnown RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 SNAP23O00161 211 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 GSPT1P15170 499 aaKnown RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 CYP7A1P22680 504 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 LMOD1P29536 600 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 ADD2P35612 726 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 PPP4CP60510 307 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 ZMYM1Q5SVZ6 1142 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 RSBN1LQ6PCB5 846 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 SAMD1Q6SPF0 538 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 CWC27Q6UX04 472 aaKnown RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 MAGEB6Q8N7X4 407 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 CHMP4CQ96CF2 233 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 HOOK2Q96ED9 719 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 CRNKL1Q9BZJ0 848 aaKnown RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 DBNDD1Q9H9R9 158 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 ATP8A2Q9NTI2 1148 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 TMOD2Q9NZR1 351 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-210ENST00000463446 SPEF2Q9C093 1822 aa8.87□□□□□ -0.99
EPHA4-210ENST00000463446 TNRC6CQ9HCJ0 1690 aaKnown RBP8.86□□□□□ -0.99
EPHA4-210ENST00000463446 IQCA1LA6NCM1 817 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 ABCB7O75027 752 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 APPP05067 770 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 PCP11498 1178 aaKnown RBP8.86□□□□□ -0.99
EPHA4-210ENST00000463446 PDE6AP16499 860 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 RBM5P52756 815 aaKnown RBP eCLIP8.86□□□□□ -0.99
EPHA4-210ENST00000463446 KRT32Q14532 448 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 DACT2Q5SW24 774 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 TBC1D9Q6ZT07 1266 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 NSUN4Q96CB9 384 aaKnown RBP8.86□□□□□ -0.99
EPHA4-210ENST00000463446 DSCC1Q9BVC3 393 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 BACH2Q9BYV9 841 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 TTF2Q9UNY4 1162 aaKnown RBP8.86□□□□□ -0.99
EPHA4-210ENST00000463446 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-210ENST00000463446 SLX4Q8IY92 1834 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 DLEC1Q9Y238 1755 aa8.86□□□□□ -0.99
EPHA4-210ENST00000463446 ZNF532Q9HCE3 1301 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 GPR75-ASB3A0A0A6YYF3 556 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 SGSM2O43147 1006 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 HMGB1P09429 215 aaKnown RBP8.85□□□□□ -0.99
EPHA4-210ENST00000463446 PSMA5P28066 241 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 TNNI2P48788 182 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 MECOMQ03112 1051 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 CXCL9Q07325 125 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 TNFAIP1Q13829 316 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 DLGAP5Q15398 846 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 ALX1Q15699 326 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 TSHZ3Q63HK5 1081 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 OLFM4Q6UX06 510 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 MTMR14Q8NCE2 650 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 ZDHHC15Q96MV8 337 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 ESYT1Q9BSJ8 1104 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 DHX36Q9H2U1 1008 aaKnown RBP8.85□□□□□ -0.99
EPHA4-210ENST00000463446 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
EPHA4-210ENST00000463446 NFKBIEO00221 500 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 RAD17O75943 681 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 ANAPC15P60006 121 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 TRDNQ13061 729 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 SCARF1Q14162 830 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
EPHA4-210ENST00000463446 PPP4R3BQ5MIZ7 849 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 FKBP1CQ5VVH2 108 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 PNMA8AQ86V59 439 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-210ENST00000463446 ANTXR1Q9H6X2 564 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 ANO2Q9NQ90 1003 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
EPHA4-210ENST00000463446 DUOX1Q9NRD9 1551 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 RNF181Q9P0P0 153 aa8.84□□□□□ -0.99
EPHA4-210ENST00000463446 CCDC171Q6TFL3 1326 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 WTIPA6NIX2 430 aaPredicted RBP8.83□□□□□ -1
EPHA4-210ENST00000463446 PSMD14O00487 310 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 ZNF213O14771 459 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 KLRK1P26718 216 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 USP5P45974 858 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 NMIQ13287 307 aaPredicted RBP8.83□□□□□ -1
EPHA4-210ENST00000463446 CCDC178Q5BJE1 867 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 C9orf131Q5VYM1 1079 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
EPHA4-210ENST00000463446 MAP4K1Q92918 833 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 STRBPQ96SI9 672 aaKnown RBP8.83□□□□□ -1
EPHA4-210ENST00000463446 RNF41Q9H4P4 317 aaPredicted RBP8.83□□□□□ -1
EPHA4-210ENST00000463446 CNOT7Q9UIV1 285 aaKnown RBP8.83□□□□□ -1
EPHA4-210ENST00000463446 SLC4A4Q9Y6R1 1079 aa8.83□□□□□ -1
EPHA4-210ENST00000463446 MROH7-TTC4A0A0A0MT08 1334 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 TCRBV5S4A2TA0A5A2 114 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 GLTPD2A6NH11 291 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 HLA-DOAP06340 250 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 HSPD1P10809 573 aaKnown RBP8.82□□□□□ -1
EPHA4-210ENST00000463446 PRDX5P30044 214 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 CRKP46108 304 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 ZNF280AP59817 542 aaPredicted RBP8.82□□□□□ -1
EPHA4-210ENST00000463446 PI16Q6UXB8 463 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
EPHA4-210ENST00000463446 KIAA0825Q8IV33 1275 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 FOXP4Q8IVH2 680 aaPredicted RBP8.82□□□□□ -1
EPHA4-210ENST00000463446 GMLQ99445 158 aa8.82□□□□□ -1
EPHA4-210ENST00000463446 USP26Q9BXU7 913 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms