RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
NIN-208ENST00000463419 NUBP1P53384 320 aa16.24■□□□□ 0.19
NIN-208ENST00000463419 PTPN12Q05209 780 aaKnown RBP16.24■□□□□ 0.19
NIN-208ENST00000463419 MOB2Q70IA6 237 aa16.24■□□□□ 0.19
NIN-208ENST00000463419 MTMR14Q8NCE2 650 aa16.24■□□□□ 0.19
NIN-208ENST00000463419 CCDC102AQ96A19 550 aa16.24■□□□□ 0.19
NIN-208ENST00000463419 TSKSQ9UJT2 592 aa16.24■□□□□ 0.19
NIN-208ENST00000463419 PCDHB13Q9Y5F0 798 aa16.24■□□□□ 0.19
NIN-208ENST00000463419 SLC10A3P09131 477 aa16.23■□□□□ 0.19
NIN-208ENST00000463419 FKBP1BP68106 108 aa16.23■□□□□ 0.19
NIN-208ENST00000463419 CFAP100Q494V2 611 aa16.23■□□□□ 0.19
NIN-208ENST00000463419 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
NIN-208ENST00000463419 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
NIN-208ENST00000463419 ARHGAP45Q92619 1136 aa16.23■□□□□ 0.19
NIN-208ENST00000463419 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
NIN-208ENST00000463419 EYA2O00167 538 aa16.22■□□□□ 0.19
NIN-208ENST00000463419 MFSD14BQ5SR56 506 aa16.22■□□□□ 0.19
NIN-208ENST00000463419 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
NIN-208ENST00000463419 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
NIN-208ENST00000463419 PAPPA2Q9BXP8 1791 aa16.22■□□□□ 0.19
NIN-208ENST00000463419 UBE2Q2LH0YL09 131 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 CA12O43570 354 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 FGFR2P21802 821 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
NIN-208ENST00000463419 KIF23Q02241 960 aaPredicted RBP16.21■□□□□ 0.19
NIN-208ENST00000463419 CAVIN4Q5BKX8 364 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
NIN-208ENST00000463419 ATG9AQ7Z3C6 839 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 PRMT6Q96LA8 375 aaPredicted RBP16.21■□□□□ 0.19
NIN-208ENST00000463419 MEIS3Q99687 375 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 LRRFIP2Q9Y608 721 aaKnown RBP16.21■□□□□ 0.19
NIN-208ENST00000463419 AOX1Q06278 1338 aa16.21■□□□□ 0.19
NIN-208ENST00000463419 CLRN2A0PK11 232 aa16.2■□□□□ 0.18
NIN-208ENST00000463419 BCAR3O75815 825 aa16.2■□□□□ 0.18
NIN-208ENST00000463419 NF2P35240 595 aa16.2■□□□□ 0.18
NIN-208ENST00000463419 BCAMP50895 628 aa16.2■□□□□ 0.18
NIN-208ENST00000463419 RBM5P52756 815 aaKnown RBP eCLIP16.2■□□□□ 0.18
NIN-208ENST00000463419 PUM3Q15397 648 aaKnown RBP16.2■□□□□ 0.18
NIN-208ENST00000463419 DEFB129Q9H1M3 183 aa16.2■□□□□ 0.18
NIN-208ENST00000463419 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
NIN-208ENST00000463419 MYO1BO43795 1136 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 SEC24BO95487 1268 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 TTLL12Q14166 644 aaPredicted RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 GRIK5Q16478 980 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 SIL1Q9H173 461 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 COL1A1P02452 1464 aaPredicted RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 IFIT1P09914 478 aaKnown RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 TRIM27P14373 513 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 PRKG1Q13976 671 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 VEZTQ9HBM0 779 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 SERPINA10Q9UK55 444 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 HDAC5Q9UQL6 1122 aa16.19■□□□□ 0.18
NIN-208ENST00000463419 COLQQ9Y215 455 aaPredicted RBP16.19■□□□□ 0.18
NIN-208ENST00000463419 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
NIN-208ENST00000463419 CIAO1O76071 339 aa16.18■□□□□ 0.18
NIN-208ENST00000463419 ATF7IPQ6VMQ6 1270 aa16.18■□□□□ 0.18
NIN-208ENST00000463419 LPIN2Q92539 896 aa16.18■□□□□ 0.18
NIN-208ENST00000463419 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
NIN-208ENST00000463419 FZD1Q9UP38 647 aa16.18■□□□□ 0.18
NIN-208ENST00000463419 PA2G4Q9UQ80 394 aaKnown RBP16.18■□□□□ 0.18
NIN-208ENST00000463419 GNAI3P08754 354 aa16.17■□□□□ 0.18
NIN-208ENST00000463419 SLC5A1P13866 664 aa16.17■□□□□ 0.18
NIN-208ENST00000463419 CRKP46108 304 aa16.17■□□□□ 0.18
NIN-208ENST00000463419 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
NIN-208ENST00000463419 PPP2R3BQ9Y5P8 575 aa16.17■□□□□ 0.18
NIN-208ENST00000463419 SSC5DA1L4H1 1573 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 ARMC9Q7Z3E5 817 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
NIN-208ENST00000463419 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 FAM163AQ96GL9 167 aaPredicted RBP16.16■□□□□ 0.18
NIN-208ENST00000463419 TDRD3Q9H7E2 651 aaKnown RBP16.16■□□□□ 0.18
NIN-208ENST00000463419 COPRSQ9NQ92 184 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 RNF186Q9NXI6 227 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 SAGE1Q9NXZ1 904 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
NIN-208ENST00000463419 ZNF70Q9UC06 446 aaPredicted RBP16.16■□□□□ 0.18
NIN-208ENST00000463419 ANGEL1Q9UNK9 670 aaKnown RBP16.16■□□□□ 0.18
NIN-208ENST00000463419 TRPA1O75762 1119 aa16.15■□□□□ 0.18
NIN-208ENST00000463419 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
NIN-208ENST00000463419 RASA3Q14644 834 aa16.15■□□□□ 0.18
NIN-208ENST00000463419 ATP2B3Q16720 1220 aa16.15■□□□□ 0.18
NIN-208ENST00000463419 LDLRAD1Q5T700 205 aa16.15■□□□□ 0.18
NIN-208ENST00000463419 LCE2DQ5TA82 110 aaPredicted RBP16.15■□□□□ 0.18
NIN-208ENST00000463419 SRGAP3O43295 1099 aa16.14■□□□□ 0.17
NIN-208ENST00000463419 MTX1Q13505 466 aa16.14■□□□□ 0.17
NIN-208ENST00000463419 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
NIN-208ENST00000463419 IFNL1Q8IU54 200 aa16.14■□□□□ 0.17
NIN-208ENST00000463419 ECM29Q5VYK3 1845 aa16.13■□□□□ 0.17
NIN-208ENST00000463419 HDLBPQ00341 1268 aaKnown RBP16.13■□□□□ 0.17
NIN-208ENST00000463419 MKRN3Q13064 507 aaKnown RBP16.13■□□□□ 0.17
NIN-208ENST00000463419 MAP3K11Q16584 847 aa16.13■□□□□ 0.17
NIN-208ENST00000463419 SUPT20HL1Q3ZLR7 823 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms