RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.78
SHQ1-203ENST00000463369 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 RFC5P40937 340 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 BMS1Q14692 1282 aaKnown RBP10.15□□□□□ -0.78
SHQ1-203ENST00000463369 TCEAL1Q15170 157 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 LRP10Q7Z4F1 713 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 PLA2G4DQ86XP0 818 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 FAM212AQ96EL1 285 aa10.15□□□□□ -0.78
SHQ1-203ENST00000463369 UPF3BQ9BZI7 483 aaKnown RBP10.15□□□□□ -0.78
SHQ1-203ENST00000463369 NBPF26B4DH59 902 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 TRIM37O94972 964 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 SYT1P21579 422 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 ZNF75DP51815 510 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 NBPF10Q6P3W6 841 aaKnown RBP10.14□□□□□ -0.79
SHQ1-203ENST00000463369 NBPF15Q8N660 670 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 CACTINQ8WUQ7 758 aaKnown RBP10.14□□□□□ -0.79
SHQ1-203ENST00000463369 EFCC1Q9HA90 598 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 ZNF446Q9NWS9 450 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.14□□□□□ -0.79
SHQ1-203ENST00000463369 MRVI1Q9Y6F6 885 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 UBR3Q6ZT12 1888 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 A1BGP04217 495 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 MYL6BP14649 208 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 DSG3P32926 999 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 RAD51AP2Q09MP3 1159 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 LUZP1Q86V48 1076 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 BANK1Q8NDB2 785 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
SHQ1-203ENST00000463369 TRERF1Q96PN7 1200 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 ANO2Q9NQ90 1003 aa10.14□□□□□ -0.79
SHQ1-203ENST00000463369 C4BP0C0L5 1744 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 TYRO3Q06418 890 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 ITPK1Q13572 414 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 ELF2Q15723 593 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 RNF20Q5VTR2 975 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 TRIM5Q9C035 493 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.13□□□□□ -0.79
SHQ1-203ENST00000463369 V9GYY5 206 aaPredicted RBP10.13□□□□□ -0.79
SHQ1-203ENST00000463369 PXDNLA1KZ92 1463 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SHQ1-203ENST00000463369 CHMLP26374 656 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
SHQ1-203ENST00000463369 PIP4K2AP48426 406 aaPredicted RBP10.13□□□□□ -0.79
SHQ1-203ENST00000463369 MARSP56192 900 aaKnown RBP10.13□□□□□ -0.79
SHQ1-203ENST00000463369 PTPN14Q15678 1187 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 MAP3K11Q16584 847 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 CBX8Q9HC52 389 aa10.13□□□□□ -0.79
SHQ1-203ENST00000463369 BCORQ6W2J9 1755 aa10.12□□□□□ -0.79
SHQ1-203ENST00000463369 SLU7O95391 586 aaKnown RBP10.12□□□□□ -0.79
SHQ1-203ENST00000463369 H2AFXP16104 143 aaPredicted RBP10.12□□□□□ -0.79
SHQ1-203ENST00000463369 DNM1Q05193 864 aaKnown RBP10.12□□□□□ -0.79
SHQ1-203ENST00000463369 MYBPC2Q14324 1141 aa10.12□□□□□ -0.79
SHQ1-203ENST00000463369 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
SHQ1-203ENST00000463369 C11orf96Q7Z7L8 435 aa10.12□□□□□ -0.79
SHQ1-203ENST00000463369 CUEDC1Q9NWM3 386 aaPredicted RBP10.12□□□□□ -0.79
SHQ1-203ENST00000463369 G3BP2Q9UN86 482 aaKnown RBP10.12□□□□□ -0.79
SHQ1-203ENST00000463369 IQSEC3Q9UPP2 1182 aaPredicted RBP10.12□□□□□ -0.79
SHQ1-203ENST00000463369 ADCY9O60503 1353 aa10.12□□□□□ -0.79
SHQ1-203ENST00000463369 PI4KAP2A4QPH2 592 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 F6X3S4 739 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 PLSCR1O15162 318 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 C4orf46Q504U0 113 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 INTS5Q6P9B9 1019 aaKnown RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 KSR2Q6VAB6 950 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 RINLQ6ZS11 566 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 LRRC8AQ8IWT6 810 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 PI4KAP1Q8N8J0 262 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 TDRD7Q8NHU6 1098 aaKnown RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 XAGE3Q8WTP9 111 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 PIK3R5Q8WYR1 880 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 YY1AP1Q9H869 796 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 CCNL1Q9UK58 526 aaPredicted RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 FHOD1Q9Y613 1164 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 TUBGCP6Q96RT7 1819 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 NEMFO60524 1076 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 CDC25BP30305 580 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 HSPA4P34932 840 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 CRKLP46109 303 aaKnown RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
SHQ1-203ENST00000463369 ANO6Q4KMQ2 910 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 MUM1L1Q5H9M0 696 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 CCDC144CPQ8IYA2 1237 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 LINC00116Q8NCU8 138 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 NUP62CLQ9H1M0 184 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 CLIP2Q9UDT6 1046 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 SMC3Q9UQE7 1217 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 ZBTB1Q9Y2K1 713 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 C4AP0C0L4 1744 aa10.11□□□□□ -0.79
SHQ1-203ENST00000463369 RAD50Q92878 1312 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms