RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 BNIP3LO60238 219 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 CILPO75339 1184 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 IMPDH2P12268 514 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 ZNF157P51786 506 aaPredicted RBP8.12□□□□□ -1.11
COPS3-205ENST00000463097 ARSHQ5FYA8 562 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 TRIM46Q7Z4K8 759 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
COPS3-205ENST00000463097 MUC3BQ9H195 1237 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 NUCKS1Q9H1E3 243 aaKnown RBP8.12□□□□□ -1.11
COPS3-205ENST00000463097 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 BRMS1Q9HCU9 246 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 HCN2Q9UL51 889 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 ZNRF3Q9ULT6 936 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 MAPK8IP1Q9UQF2 711 aa8.12□□□□□ -1.11
COPS3-205ENST00000463097 J3QW42 95 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 TRIM37O94972 964 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 NME2P22392 152 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 CLCQ05315 142 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 SEPT6Q14141 434 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 FXNQ16595 210 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 KANK3Q6NY19 840 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 RBBP8NLQ8NC74 664 aaPredicted RBP8.11□□□□□ -1.11
COPS3-205ENST00000463097 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 NDFIP2Q9NV92 336 aa8.11□□□□□ -1.11
COPS3-205ENST00000463097 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 H7C1W4 665 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 GYS2P54840 703 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 GPLD1P80108 840 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 ATP11AP98196 1134 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 LRRC14Q15048 493 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 LARP1BQ659C4 914 aaKnown RBP8.1□□□□□ -1.11
COPS3-205ENST00000463097 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
COPS3-205ENST00000463097 TNKS2Q9H2K2 1166 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
COPS3-205ENST00000463097 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
COPS3-205ENST00000463097 BPNT1O95861 308 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 CD33P20138 364 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 CASP7P55210 303 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
COPS3-205ENST00000463097 NEUROD1Q13562 356 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 HFE2Q6ZVN8 426 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 LSRQ86X29 649 aaPredicted RBP8.09□□□□□ -1.11
COPS3-205ENST00000463097 BSNDQ8WZ55 320 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 POP1Q99575 1024 aaKnown RBP8.09□□□□□ -1.11
COPS3-205ENST00000463097 KLHL42Q9P2K6 505 aa8.09□□□□□ -1.11
COPS3-205ENST00000463097 AVPP01185 164 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 GHRHP01286 108 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 PCDH1Q08174 1060 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 SQSTM1Q13501 440 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 SULF2Q8IWU5 870 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 RPUSD2Q8IZ73 545 aaKnown RBP8.08□□□□□ -1.12
COPS3-205ENST00000463097 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 PLA2G2EQ9NZK7 142 aa8.08□□□□□ -1.12
COPS3-205ENST00000463097 GJB6O95452 261 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 B3GALT4O96024 378 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 ARNTP27540 789 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 AMPD3Q01432 767 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 PPP2R5EQ16537 467 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 DBN1Q16643 649 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 ZNF423Q2M1K9 1284 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 MTERF2Q49AM1 385 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 TAF7LQ5H9L4 462 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 GRIN3AQ8TCU5 1115 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 STK35Q8TDR2 534 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 THAP3Q8WTV1 239 aaPredicted RBP8.07□□□□□ -1.12
COPS3-205ENST00000463097 POLR3GLQ9BT43 218 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 EMILIN2Q9BXX0 1053 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 CBX8Q9HC52 389 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 LEMD3Q9Y2U8 911 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 PCDHB14Q9Y5E9 798 aa8.07□□□□□ -1.12
COPS3-205ENST00000463097 MAN1A2O60476 641 aa8.06□□□□□ -1.12
COPS3-205ENST00000463097 SMNDC1O75940 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
COPS3-205ENST00000463097 RPL6Q02878 288 aaKnown RBP8.06□□□□□ -1.12
COPS3-205ENST00000463097 PCSK7Q16549 785 aa8.06□□□□□ -1.12
COPS3-205ENST00000463097 C2orf27AQ580R0 203 aa8.06□□□□□ -1.12
COPS3-205ENST00000463097 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
COPS3-205ENST00000463097 FEZ1Q99689 392 aa8.06□□□□□ -1.12
COPS3-205ENST00000463097 IGFLR1Q9H665 355 aa8.06□□□□□ -1.12
COPS3-205ENST00000463097 SLC35F4A4IF30 521 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 DDAH1O94760 285 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 SCARA3Q6AZY7 606 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 TRIM22Q8IYM9 498 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
COPS3-205ENST00000463097 GAL3ST3Q96A11 431 aa8.05□□□□□ -1.12
COPS3-205ENST00000463097 ATXN7L1Q9ULK2 861 aaPredicted RBP8.05□□□□□ -1.12
COPS3-205ENST00000463097 ATE1O95260 518 aa8.04□□□□□ -1.12
COPS3-205ENST00000463097 MASP1P48740 699 aa8.04□□□□□ -1.12
COPS3-205ENST00000463097 PTSQ03393 145 aa8.04□□□□□ -1.12
COPS3-205ENST00000463097 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
COPS3-205ENST00000463097 DNAJB12Q9NXW2 375 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms