RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 PPP2R3AQ06190 1150 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 CWF19L2Q2TBE0 894 aaKnown RBP5.45□□□□□ -1.54
GPNMB-205ENST00000463011 PLEKHG4Q58EX7 1191 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 LRRC3Q9BY71 257 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 CCDC113Q9H0I3 377 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 NDFIP2Q9NV92 336 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 ACTR10Q9NZ32 417 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 PDZRN3Q9UPQ7 1066 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 SAMM50Q9Y512 469 aa5.45□□□□□ -1.54
GPNMB-205ENST00000463011 H7C1W4 665 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 MARCH6O60337 910 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 GFRA3O60609 400 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 TRIM37O94972 964 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 GHRHP01286 108 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 NME2P22392 152 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 GPLD1P80108 840 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 PTSQ03393 145 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 CLCQ05315 142 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 TBC1D8BQ0IIM8 1120 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 IFRD2Q12894 506 aaPredicted RBP5.44□□□□□ -1.54
GPNMB-205ENST00000463011 MPP2Q14168 576 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 DDR2Q16832 855 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 CEP135Q66GS9 1140 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 ZCRB1Q8TBF4 217 aaKnown RBP5.44□□□□□ -1.54
GPNMB-205ENST00000463011 GRIN3AQ8TCU5 1115 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 TRPM4Q8TD43 1214 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 STK35Q8TDR2 534 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 TNKS2Q9H2K2 1166 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 CBX8Q9HC52 389 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 NOP58Q9Y2X3 529 aaKnown RBP5.44□□□□□ -1.54
GPNMB-205ENST00000463011 MSRB2Q9Y3D2 182 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 COL4A3BPQ9Y5P4 624 aa5.44□□□□□ -1.54
GPNMB-205ENST00000463011 ESYT3A0FGR9 886 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 SLC35F4A4IF30 521 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 PPP1R12AO14974 1030 aaPredicted RBP5.43□□□□□ -1.54
GPNMB-205ENST00000463011 PDPK1O15530 556 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 DNAJC6O75061 913 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 CILPO75339 1184 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 CDC45O75419 566 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 BPNT1O95861 308 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 PCDH1Q08174 1060 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 NEUROD1Q13562 356 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 PPP2R5EQ16537 467 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 ZNF423Q2M1K9 1284 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 LARP1BQ659C4 914 aaKnown RBP5.43□□□□□ -1.54
GPNMB-205ENST00000463011 REC114Q7Z4M0 266 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 SULF2Q8IWU5 870 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 MICAL1Q8TDZ2 1067 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 BSNDQ8WZ55 320 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 APPBP2Q92624 585 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 CHMP4AQ9BY43 222 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 RBSNQ9H1K0 784 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 CLEC4MQ9H2X3 399 aaPredicted RBP5.43□□□□□ -1.54
GPNMB-205ENST00000463011 SPC25Q9HBM1 224 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 CYP8B1Q9UNU6 501 aa5.43□□□□□ -1.54
GPNMB-205ENST00000463011 AXIN1O15169 862 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 SMNDC1O75940 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 EIF2AK2P19525 551 aaKnown RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 ARNTP27540 789 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 LRRC14Q15048 493 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 DIEXFQ68CQ4 756 aaKnown RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 LLGL2Q6P1M3 1020 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 ADAMTSL4Q6UY14 1074 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 TRIM22Q8IYM9 498 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 REXO1Q8N1G1 1221 aaKnown RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 OR6P1Q8NGX9 317 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 GTPBP3Q969Y2 492 aaKnown RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 BRINP2Q9C0B6 783 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 UBE2OQ9C0C9 1292 aaKnown RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 SLKQ9H2G2 1235 aaPredicted RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 PCDH12Q9NPG4 1184 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 DNAJB12Q9NXW2 375 aaKnown RBP5.42□□□□□ -1.54
GPNMB-205ENST00000463011 PRR12Q9ULL5 1215 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 ZNRF3Q9ULT6 936 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 MAPK8IP1Q9UQF2 711 aa5.42□□□□□ -1.54
GPNMB-205ENST00000463011 B3GALT4O96024 378 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 FGFR3P22607 806 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 SMCPP49901 116 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-205ENST00000463011 GYS2P54840 703 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 CTBSQ01459 385 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-205ENST00000463011 RASGRF1Q13972 1273 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 FXNQ16595 210 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 MPRIPQ6WCQ1 1025 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 RUFY4Q6ZNE9 571 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 VN1R5Q7Z5H4 357 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 LSRQ86X29 649 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-205ENST00000463011 HOMER1Q86YM7 354 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 MICALL1Q8N3F8 863 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 CCDC155Q8N6L0 562 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 ATXN7L1Q9ULK2 861 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-205ENST00000463011 PCDHB14Q9Y5E9 798 aa5.41□□□□□ -1.54
GPNMB-205ENST00000463011 GRIN3BO60391 1043 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 DDAH1O94760 285 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 GJB6O95452 261 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 IMPDH2P12268 514 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 CPB1P15086 417 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 FAM182BQ5T319 152 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 SYT9Q86SS6 491 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms