RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 GEMIN4P57678 1058 aaKnown RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 FOXK2Q01167 660 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 SSRP1Q08945 709 aaKnown RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 GRIN2CQ14957 1233 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 C21orf62-AS1Q17RA5 79 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 PUS10Q3MIT2 529 aaKnown RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 SPRYD7Q5W111 196 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 GET4Q7L5D6 327 aaPredicted RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 PODNQ7Z5L7 613 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 SH3RF1Q7Z6J0 888 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 KRT77Q7Z794 578 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 ZNF598Q86UK7 904 aaKnown RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 TTC16Q8NEE8 873 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 ST13P5Q8NFI4 369 aaPredicted RBP7.68□□□□□ -1.18
SGCE-209ENST00000462731 OR6P1Q8NGX9 317 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 HOOK2Q96ED9 719 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 SELENOOQ9BVL4 669 aa7.68□□□□□ -1.18
SGCE-209ENST00000462731 KLRG2A4D1S0 409 aaPredicted RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 GDF10P55107 478 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 EIF6P56537 245 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 PSMA6P60900 246 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 ERFEQ4G0M1 354 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 HYIQ5T013 277 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 FBXL19Q6PCT2 694 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 MORC1Q86VD1 984 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 UBR7Q8N806 425 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 NGDNQ8NEJ9 315 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 PPHLN1Q8NEY8 458 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 PJA1Q8NG27 643 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 SECISBP2LQ93073 1101 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 ERP27Q96DN0 273 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 SLC10A4Q96EP9 437 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 RHOVQ96L33 236 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 SARGQ9BW04 601 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 CARD14Q9BXL6 1004 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 AASDHPPTQ9NRN7 309 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 ATG3Q9NT62 314 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 OBP2AQ9NY56 170 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 PFDN2Q9UHV9 154 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 PUF60Q9UHX1 559 aaKnown RBP7.67□□□□□ -1.18
SGCE-209ENST00000462731 ZMYM5Q9UJ78 669 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 RABGAP1Q9Y3P9 1069 aa7.67□□□□□ -1.18
SGCE-209ENST00000462731 RASSF10A6NK89 507 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 HIP1RO75146 1068 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 EYA4O95677 639 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 U2AF1L5P0DN76 240 aaPredicted RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 GSTT1P30711 240 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 SARSP49591 514 aaKnown RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 U2AF1Q01081 240 aaKnown RBP eCLIP7.66□□□□□ -1.18
SGCE-209ENST00000462731 MTMR1Q13613 665 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 LONRF2Q1L5Z9 754 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 CCDC96Q2M329 555 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 CCDC93Q567U6 631 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 IL31Q6EBC2 164 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 CXorf57Q6NSI4 855 aaKnown RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 CC2D1AQ6P1N0 951 aaPredicted RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 POTEAQ6S8J7 498 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 NXPE4Q6UWF7 544 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 CCDC81Q6ZN84 652 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 SPATC1Q76KD6 591 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 ZBTB46Q86UZ6 589 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 SLITRK4Q8IW52 837 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 TTC14Q96N46 770 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 SLC4A9Q96Q91 983 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 STRBPQ96SI9 672 aaKnown RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 NUDT12Q9BQG2 462 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 CLIC5Q9NZA1 410 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 ZNF180Q9UJW8 692 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 NOB1Q9ULX3 412 aaKnown RBP7.66□□□□□ -1.18
SGCE-209ENST00000462731 AKAP2Q9Y2D5 859 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 NUB1Q9Y5A7 615 aa7.66□□□□□ -1.18
SGCE-209ENST00000462731 ANO9A1A5B4 782 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 DYTNA2CJ06 578 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 C11orf95C9JLR9 678 aaPredicted RBP7.65□□□□□ -1.18
SGCE-209ENST00000462731 GARTP22102 1010 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 DDIT3P35638 169 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 NEK3P51956 506 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 CASP7P55210 303 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 PABPC4Q13310 644 aaKnown RBP eCLIP7.65□□□□□ -1.18
SGCE-209ENST00000462731 SEPT6Q14141 434 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 KRT72Q14CN4 511 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 SETDB1Q15047 1291 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 C11orf91Q3C1V1 193 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 C8orf34Q49A92 452 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 ZC3H12BQ5HYM0 836 aaKnown RBP7.65□□□□□ -1.18
SGCE-209ENST00000462731 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 TTLL5Q6EMB2 1281 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 CREBRFQ8IUR6 639 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 ATXN2LQ8WWM7 1075 aaKnown RBP7.65□□□□□ -1.18
SGCE-209ENST00000462731 NKD1Q969G9 470 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 TRMT2BQ96GJ1 504 aaKnown RBP7.65□□□□□ -1.18
SGCE-209ENST00000462731 SLC26A8Q96RN1 970 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 SMAD5Q99717 465 aaKnown RBP7.65□□□□□ -1.18
SGCE-209ENST00000462731 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 GGNBP2Q9H3C7 697 aa7.65□□□□□ -1.18
SGCE-209ENST00000462731 UBP1Q9NZI7 540 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms