RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 TRPM4Q8TD43 1214 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 HAUS7Q99871 368 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 ANTXR1Q9H6X2 564 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 MYOZ2Q9NPC6 264 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 STAP2Q9UGK3 403 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 MAST3O60307 1309 aa14.37□□□□□ -0.11
CPNE1-221ENST00000462352 ERC2O15083 957 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 PDE4AP27815 886 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 HIRAP54198 1017 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-221ENST00000462352 PDE1AP54750 535 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 KIF4BQ2VIQ3 1234 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 EAPPQ56P03 285 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-221ENST00000462352 ERICH6Q7L0X2 663 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 PNMA8AQ86V59 439 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-221ENST00000462352 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 PIH1D3Q9NQM4 214 aaKnown RBP14.36□□□□□ -0.11
CPNE1-221ENST00000462352 LRP2BPQ9P2M1 347 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 SERPINA10Q9UK55 444 aa14.36□□□□□ -0.11
CPNE1-221ENST00000462352 GOLIM4O00461 696 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 GLRX3O76003 335 aaKnown RBP14.35□□□□□ -0.11
CPNE1-221ENST00000462352 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 POTEJP0CG39 1038 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 CRKP46108 304 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 HDLBPQ00341 1268 aaKnown RBP14.35□□□□□ -0.11
CPNE1-221ENST00000462352 TTF1Q15361 905 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-221ENST00000462352 CFAP100Q494V2 611 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 DZIP1Q86YF9 867 aaKnown RBP14.35□□□□□ -0.11
CPNE1-221ENST00000462352 EDC3Q96F86 508 aaKnown RBP14.35□□□□□ -0.11
CPNE1-221ENST00000462352 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 RAI14Q9P0K7 980 aa14.35□□□□□ -0.11
CPNE1-221ENST00000462352 WNT10BO00744 389 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 RBM5P52756 815 aaKnown RBP eCLIP14.34□□□□□ -0.11
CPNE1-221ENST00000462352 MECOMQ03112 1051 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 DIXDC1Q155Q3 683 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 HHIPL2Q6UWX4 724 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 MTMR14Q8NCE2 650 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 ZNF384Q8TF68 577 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 TEKT1Q969V4 418 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 NSUN4Q96CB9 384 aaKnown RBP14.34□□□□□ -0.11
CPNE1-221ENST00000462352 ZBED3Q96IU2 234 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-221ENST00000462352 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 PCDHAC2Q9Y5I4 1007 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 AOX1Q06278 1338 aa14.34□□□□□ -0.11
CPNE1-221ENST00000462352 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
CPNE1-221ENST00000462352 IGSF3O75054 1194 aa14.33□□□□□ -0.12
CPNE1-221ENST00000462352 IDH1O75874 414 aaKnown RBP14.33□□□□□ -0.12
CPNE1-221ENST00000462352 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
CPNE1-221ENST00000462352 NBPF9Q3BBW0 867 aa14.33□□□□□ -0.12
CPNE1-221ENST00000462352 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
CPNE1-221ENST00000462352 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
CPNE1-221ENST00000462352 MAP4K4O95819 1239 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-221ENST00000462352 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
CPNE1-221ENST00000462352 SLF2Q8IX21 1173 aa14.32□□□□□ -0.12
CPNE1-221ENST00000462352 ZC3H15Q8WU90 426 aaKnown RBP14.32□□□□□ -0.12
CPNE1-221ENST00000462352 PRMT6Q96LA8 375 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-221ENST00000462352 ZDHHC15Q96MV8 337 aa14.32□□□□□ -0.12
CPNE1-221ENST00000462352 DAGLAQ9Y4D2 1042 aa14.32□□□□□ -0.12
CPNE1-221ENST00000462352 ASTN2O75129 1339 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-221ENST00000462352 DOCK2Q92608 1830 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 TOMM70O94826 608 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 LDHCP07864 332 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 GSTO1P78417 241 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 MAP3K12Q12852 859 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-221ENST00000462352 APOBEC3HQ6NTF7 200 aaKnown RBP14.31□□□□□ -0.12
CPNE1-221ENST00000462352 FAM163AQ96GL9 167 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-221ENST00000462352 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 MROH7-TTC4A0A0A0MT08 1334 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 GAKO14976 1311 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 MAST2Q6P0Q8 1798 aa14.31□□□□□ -0.12
CPNE1-221ENST00000462352 MYO5AQ9Y4I1 1855 aaKnown RBP14.31□□□□□ -0.12
CPNE1-221ENST00000462352 ANGEL2Q5VTE6 544 aaKnown RBP14.3□□□□□ -0.12
CPNE1-221ENST00000462352 CHADLQ6NUI6 762 aa14.3□□□□□ -0.12
CPNE1-221ENST00000462352 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
CPNE1-221ENST00000462352 MAGEB6Q8N7X4 407 aa14.3□□□□□ -0.12
CPNE1-221ENST00000462352 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
CPNE1-221ENST00000462352 RBM46Q8TBY0 533 aaKnown RBP14.3□□□□□ -0.12
CPNE1-221ENST00000462352 GGA3Q9NZ52 723 aa14.3□□□□□ -0.12
CPNE1-221ENST00000462352 CLRN2A0PK11 232 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 MYO1BO43795 1136 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 PDE6AP16499 860 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 CYP7A1P22680 504 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 BTDP43251 543 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 SLC9C2Q5TAH2 1124 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 MAP1SQ66K74 1059 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-221ENST00000462352 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-221ENST00000462352 ADGRA1Q86SQ6 560 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.29□□□□□ -0.122e-7■■■■■ 40.9
CPNE1-221ENST00000462352 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
CPNE1-221ENST00000462352 MYH2Q9UKX2 1941 aa14.29□□□□□ -0.12
CPNE1-221ENST00000462352 GPR75-ASB3A0A0A6YYF3 556 aa14.28□□□□□ -0.12
CPNE1-221ENST00000462352 ADD2P35612 726 aa14.28□□□□□ -0.12
CPNE1-221ENST00000462352 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
CPNE1-221ENST00000462352 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
CPNE1-221ENST00000462352 DCPSQ96C86 337 aaKnown RBP14.28□□□□□ -0.12
CPNE1-221ENST00000462352 EVI5LQ96CN4 794 aa14.28□□□□□ -0.12
CPNE1-221ENST00000462352 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms