RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 CLRN2A0PK11 232 aa16.43■□□□□ 0.22
C9orf3-210ENST00000462125 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
C9orf3-210ENST00000462125 ATP2B3Q16720 1220 aa16.43■□□□□ 0.22
C9orf3-210ENST00000462125 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
C9orf3-210ENST00000462125 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
C9orf3-210ENST00000462125 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-210ENST00000462125 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-210ENST00000462125 RASA3Q14644 834 aa16.42■□□□□ 0.22
C9orf3-210ENST00000462125 SUPT20HL1Q3ZLR7 823 aa16.42■□□□□ 0.22
C9orf3-210ENST00000462125 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
C9orf3-210ENST00000462125 WDR66Q8TBY9 1149 aa16.42■□□□□ 0.22
C9orf3-210ENST00000462125 TDRD3Q9H7E2 651 aaKnown RBP16.42■□□□□ 0.22
C9orf3-210ENST00000462125 UNCXA6NJT0 531 aa16.41■□□□□ 0.22
C9orf3-210ENST00000462125 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-210ENST00000462125 ZDHHC15Q96MV8 337 aa16.41■□□□□ 0.22
C9orf3-210ENST00000462125 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
C9orf3-210ENST00000462125 GNL3LQ9NVN8 582 aaKnown RBP16.41■□□□□ 0.22
C9orf3-210ENST00000462125 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 SEMA3EO15041 775 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 ZBTB7BO15156 539 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-210ENST00000462125 PPP1R12BO60237 982 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-210ENST00000462125 TIMM10P62072 90 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 TNFAIP1Q13829 316 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 NBPF12Q5TAG4 269 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-210ENST00000462125 HHIPL2Q6UWX4 724 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 SAGE1Q9NXZ1 904 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
C9orf3-210ENST00000462125 AKAP2Q9Y2D5 859 aa16.4■□□□□ 0.22
C9orf3-210ENST00000462125 PHKA1P46020 1223 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
C9orf3-210ENST00000462125 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 DENND2AQ9ULE3 1009 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 MAST3O60307 1309 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
C9orf3-210ENST00000462125 A0A1B0GUL7 405 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 USP2O75604 605 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-210ENST00000462125 RLBP1P12271 317 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 ADORA1P30542 326 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 TM4SF4P48230 202 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 ATP8B2P98198 1209 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 TFCP2Q12800 502 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 PRKG1Q13976 671 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
C9orf3-210ENST00000462125 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-210ENST00000462125 TNNI2P48788 182 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 POLA2Q14181 598 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 FTSJ3Q8IY81 847 aaKnown RBP16.37■□□□□ 0.21
C9orf3-210ENST00000462125 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 SSC5DA1L4H1 1573 aa16.37■□□□□ 0.21
C9orf3-210ENST00000462125 TRPA1O75762 1119 aa16.36■□□□□ 0.21
C9orf3-210ENST00000462125 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
C9orf3-210ENST00000462125 FAM83AQ86UY5 434 aa16.36■□□□□ 0.21
C9orf3-210ENST00000462125 SLC10A4Q96EP9 437 aa16.36■□□□□ 0.21
C9orf3-210ENST00000462125 XAGE2Q96GT9 111 aa16.36■□□□□ 0.21
C9orf3-210ENST00000462125 PDS5AQ29RF7 1337 aaKnown RBP16.36■□□□□ 0.21
C9orf3-210ENST00000462125 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
C9orf3-210ENST00000462125 TCP10L2B9ZVM9 353 aa16.35■□□□□ 0.21
C9orf3-210ENST00000462125 PRDX5P30044 214 aa16.35■□□□□ 0.21
C9orf3-210ENST00000462125 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
C9orf3-210ENST00000462125 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
C9orf3-210ENST00000462125 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
C9orf3-210ENST00000462125 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
C9orf3-210ENST00000462125 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
C9orf3-210ENST00000462125 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
C9orf3-210ENST00000462125 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
C9orf3-210ENST00000462125 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
C9orf3-210ENST00000462125 TMEM39BQ9GZU3 492 aa16.34■□□□□ 0.21
C9orf3-210ENST00000462125 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
C9orf3-210ENST00000462125 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-210ENST00000462125 INHBEP58166 350 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 ANKRD13AQ8IZ07 590 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-210ENST00000462125 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
C9orf3-210ENST00000462125 MS4A1P11836 297 aa16.32■□□□□ 0.2
C9orf3-210ENST00000462125 CACNB3P54284 484 aa16.32■□□□□ 0.2
C9orf3-210ENST00000462125 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
C9orf3-210ENST00000462125 DIXDC1Q155Q3 683 aa16.32■□□□□ 0.2
C9orf3-210ENST00000462125 CDC42EP5Q6NZY7 148 aa16.32■□□□□ 0.2
C9orf3-210ENST00000462125 MANSC4A6NHS7 340 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-210ENST00000462125 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
C9orf3-210ENST00000462125 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
C9orf3-210ENST00000462125 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-210ENST00000462125 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
C9orf3-210ENST00000462125 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
C9orf3-210ENST00000462125 WNK4Q96J92 1243 aa16.31■□□□□ 0.2
C9orf3-210ENST00000462125 CFHR5Q9BXR6 569 aa16.31■□□□□ 0.2
C9orf3-210ENST00000462125 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
C9orf3-210ENST00000462125 GAKO14976 1311 aa16.3■□□□□ 0.2
C9orf3-210ENST00000462125 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-210ENST00000462125 MAP3K9P80192 1104 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms