RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
BRCA1-207ENST00000461798 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 EYA2O00167 538 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 PTPN12Q05209 780 aaKnown RBP11.47□□□□□ -0.57
BRCA1-207ENST00000461798 MAP3K11Q16584 847 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 MFSD14BQ5SR56 506 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 MOB2Q70IA6 237 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 KLHDC4Q8TBB5 520 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 MRIQ9BWK5 157 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 RNF186Q9NXI6 227 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 TSKSQ9UJT2 592 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 PCDHAC2Q9Y5I4 1007 aa11.47□□□□□ -0.57
BRCA1-207ENST00000461798 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 COL1A1P02452 1464 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-207ENST00000461798 F8W031 263 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-207ENST00000461798 MYO1BO43795 1136 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-207ENST00000461798 HDLBPQ00341 1268 aaKnown RBP11.46□□□□□ -0.57
BRCA1-207ENST00000461798 CAVIN4Q5BKX8 364 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 INTS3Q68E01 1043 aaKnown RBP11.46□□□□□ -0.57
BRCA1-207ENST00000461798 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 ARMC9Q7Z3E5 817 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 TTF2Q9UNY4 1162 aaKnown RBP11.46□□□□□ -0.57
BRCA1-207ENST00000461798 JAG2Q9Y219 1238 aa11.46□□□□□ -0.57
BRCA1-207ENST00000461798 POTEFA5A3E0 1075 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 CIAO1O76071 339 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 TM4SF4P48230 202 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 TTLL12Q14166 644 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-207ENST00000461798 PUM3Q15397 648 aaKnown RBP11.45□□□□□ -0.58
BRCA1-207ENST00000461798 SUPT20HL1Q3ZLR7 823 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 LPIN2Q92539 896 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 ABHD8Q96I13 439 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 SUGT1Q9Y2Z0 365 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 A0A1B0GUL6 1792 aa11.45□□□□□ -0.58
BRCA1-207ENST00000461798 AOX1Q06278 1338 aa11.44□□□□□ -0.58
BRCA1-207ENST00000461798 IPO8O15397 1037 aaKnown RBP11.44□□□□□ -0.58
BRCA1-207ENST00000461798 TRPA1O75762 1119 aa11.44□□□□□ -0.58
BRCA1-207ENST00000461798 IFIT1P09914 478 aaKnown RBP11.44□□□□□ -0.58
BRCA1-207ENST00000461798 BCAMP50895 628 aa11.44□□□□□ -0.58
BRCA1-207ENST00000461798 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-207ENST00000461798 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
BRCA1-207ENST00000461798 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
BRCA1-207ENST00000461798 ZNF70Q9UC06 446 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-207ENST00000461798 CLRN2A0PK11 232 aa11.43□□□□□ -0.58
BRCA1-207ENST00000461798 PPP1R12BO60237 982 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-207ENST00000461798 IL15P40933 162 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-207ENST00000461798 CRKP46108 304 aa11.43□□□□□ -0.58
BRCA1-207ENST00000461798 RBM5P52756 815 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRCA1-207ENST00000461798 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
BRCA1-207ENST00000461798 RASA3Q14644 834 aa11.43□□□□□ -0.58
BRCA1-207ENST00000461798 GRIK5Q16478 980 aa11.43□□□□□ -0.58
BRCA1-207ENST00000461798 ANGEL1Q9UNK9 670 aaKnown RBP11.43□□□□□ -0.58
BRCA1-207ENST00000461798 LRRFIP2Q9Y608 721 aaKnown RBP11.43□□□□□ -0.58
BRCA1-207ENST00000461798 USP2O75604 605 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-207ENST00000461798 GNAI3P08754 354 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 SLC5A1P13866 664 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 INHBEP58166 350 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 MTX1Q13505 466 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
BRCA1-207ENST00000461798 NBPF12Q5TAG4 269 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-207ENST00000461798 SPRYD7Q5W111 196 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 MIER1Q8N108 512 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 SLC10A4Q96EP9 437 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 MEIS3Q99687 375 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 CFHR5Q9BXR6 569 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 MCOLN1Q9GZU1 580 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 TDRD3Q9H7E2 651 aaKnown RBP11.42□□□□□ -0.58
BRCA1-207ENST00000461798 VEZTQ9HBM0 779 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
BRCA1-207ENST00000461798 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-207ENST00000461798 FRAT2O75474 233 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-207ENST00000461798 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-207ENST00000461798 PRKG1Q13976 671 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 FKBP1CQ5VVH2 108 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
BRCA1-207ENST00000461798 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 ATF7IPQ6VMQ6 1270 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 TEKT1Q969V4 418 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 ZDHHC15Q96MV8 337 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 SSC5DA1L4H1 1573 aa11.41□□□□□ -0.58
BRCA1-207ENST00000461798 SEMA3EO15041 775 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 BCAR3O75815 825 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 ZBTB48P10074 688 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-207ENST00000461798 TRIM27P14373 513 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 IREB2P48200 963 aaKnown RBP11.4□□□□□ -0.58
BRCA1-207ENST00000461798 TNNI2P48788 182 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 SREBF2Q12772 1141 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 ATP2B3Q16720 1220 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 APOBEC3HQ6NTF7 200 aaKnown RBP11.4□□□□□ -0.58
BRCA1-207ENST00000461798 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
BRCA1-207ENST00000461798 FZD1Q9UP38 647 aa11.4□□□□□ -0.58
BRCA1-207ENST00000461798 MAST3O60307 1309 aa11.39□□□□□ -0.59
BRCA1-207ENST00000461798 MANSC4A6NHS7 340 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-207ENST00000461798 DGKZQ13574 1117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms