RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 CAVIN4Q5BKX8 364 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 PRMT6Q96LA8 375 aaPredicted RBP12.5□□□□□ -0.41
SYN3-206ENST00000461446 ZIC5Q96T25 663 aa12.5□□□□□ -0.41
SYN3-206ENST00000461446 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
SYN3-206ENST00000461446 CLRN2A0PK11 232 aa12.49□□□□□ -0.41
SYN3-206ENST00000461446 APBB1O00213 710 aa12.49□□□□□ -0.41
SYN3-206ENST00000461446 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
SYN3-206ENST00000461446 MMP14P50281 582 aa12.49□□□□□ -0.41
SYN3-206ENST00000461446 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYN3-206ENST00000461446 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
SYN3-206ENST00000461446 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
SYN3-206ENST00000461446 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 IGHDP01880 384 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 MAP2K1Q02750 393 aaPredicted RBP12.48□□□□□ -0.41
SYN3-206ENST00000461446 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 MTMR14Q8NCE2 650 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 EAF2Q96CJ1 260 aaPredicted RBP12.48□□□□□ -0.41
SYN3-206ENST00000461446 NEUROD6Q96NK8 337 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
SYN3-206ENST00000461446 FAM155AB1AL88 458 aaPredicted RBP12.47□□□□□ -0.41
SYN3-206ENST00000461446 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 ADORA1P30542 326 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 MAP2K2P36507 400 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
SYN3-206ENST00000461446 APOBEC3FQ8IUX4 373 aaKnown RBP12.47□□□□□ -0.41
SYN3-206ENST00000461446 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
SYN3-206ENST00000461446 GCC1Q96CN9 775 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 LRRCC1Q9C099 1032 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 DEFB129Q9H1M3 183 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 VEZTQ9HBM0 779 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 IL1RAPL2Q9NP60 686 aa12.47□□□□□ -0.41
SYN3-206ENST00000461446 CTCFP49711 727 aaPredicted RBP12.46□□□□□ -0.41
SYN3-206ENST00000461446 LBX1P52954 281 aa12.46□□□□□ -0.41
SYN3-206ENST00000461446 PRKG1Q13976 671 aa12.46□□□□□ -0.41
SYN3-206ENST00000461446 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
SYN3-206ENST00000461446 CCDC102BQ68D86 513 aa12.46□□□□□ -0.41
SYN3-206ENST00000461446 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
SYN3-206ENST00000461446 FZD1Q9UP38 647 aa12.46□□□□□ -0.41
SYN3-206ENST00000461446 THSD7BQ9C0I4 1608 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 ZBTB22O15209 634 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 MYO1BO43795 1136 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 SMARCA5O60264 1052 aaPredicted RBP12.45□□□□□ -0.42
SYN3-206ENST00000461446 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
SYN3-206ENST00000461446 PHKA1P46020 1223 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 CRKP46108 304 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 NOGQ13253 232 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 AACSQ86V21 672 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 SMC5Q8IY18 1101 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 TBC1D22AQ8WUA7 517 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
SYN3-206ENST00000461446 TDRD3Q9H7E2 651 aaKnown RBP12.45□□□□□ -0.42
SYN3-206ENST00000461446 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
SYN3-206ENST00000461446 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
SYN3-206ENST00000461446 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
SYN3-206ENST00000461446 NF2P35240 595 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 FKBP1BP68106 108 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 GORABQ5T7V8 394 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
SYN3-206ENST00000461446 GNL3LQ9NVN8 582 aaKnown RBP12.44□□□□□ -0.42
SYN3-206ENST00000461446 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
SYN3-206ENST00000461446 ZNF70Q9UC06 446 aaPredicted RBP12.44□□□□□ -0.42
SYN3-206ENST00000461446 PAPPA2Q9BXP8 1791 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 SEMA3EO15041 775 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 SLC10A3P09131 477 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
SYN3-206ENST00000461446 KIF23Q02241 960 aaPredicted RBP12.43□□□□□ -0.42
SYN3-206ENST00000461446 RASA3Q14644 834 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 CCDC158Q5M9N0 1113 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 NBPF12Q5TAG4 269 aaPredicted RBP12.43□□□□□ -0.42
SYN3-206ENST00000461446 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
SYN3-206ENST00000461446 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 TCP10L2B9ZVM9 353 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 UQCRFS1P1P0C7P4 283 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 ARID4AP29374 1257 aaPredicted RBP12.42□□□□□ -0.42
SYN3-206ENST00000461446 CACNB3P54284 484 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 MKRN3Q13064 507 aaKnown RBP12.42□□□□□ -0.42
SYN3-206ENST00000461446 CDAN1Q8IWY9 1227 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
SYN3-206ENST00000461446 BCL11AQ9H165 835 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
SYN3-206ENST00000461446 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
SYN3-206ENST00000461446 SSC5DA1L4H1 1573 aa12.42□□□□□ -0.42
SYN3-206ENST00000461446 ECM29Q5VYK3 1845 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms