RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 ARMC9Q7Z3E5 817 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
NUP50-213ENST00000461437 ARHGAP45Q92619 1136 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 CLMNQ96JQ2 1002 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 SPDYE2Q495Y8 402 aa19.33■□□□□ 0.68
NUP50-213ENST00000461437 LPIN2Q92539 896 aa19.33■□□□□ 0.68
NUP50-213ENST00000461437 ABHD8Q96I13 439 aa19.33■□□□□ 0.68
NUP50-213ENST00000461437 SERPINA10Q9UK55 444 aa19.33■□□□□ 0.68
NUP50-213ENST00000461437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.33■□□□□ 0.68
NUP50-213ENST00000461437 AK9Q5TCS8 1911 aa19.33■□□□□ 0.68
NUP50-213ENST00000461437 CIAO1O76071 339 aa19.32■□□□□ 0.68
NUP50-213ENST00000461437 TMEM57Q8N5G2 664 aa19.32■□□□□ 0.68
NUP50-213ENST00000461437 CEP126Q9P2H0 1117 aa19.32■□□□□ 0.68
NUP50-213ENST00000461437 MYH2Q9UKX2 1941 aa19.31■□□□□ 0.68
NUP50-213ENST00000461437 SRGAP3O43295 1099 aa19.31■□□□□ 0.68
NUP50-213ENST00000461437 PHKA1P46020 1223 aa19.31■□□□□ 0.68
NUP50-213ENST00000461437 LDLRAD1Q5T700 205 aa19.31■□□□□ 0.68
NUP50-213ENST00000461437 TMEM39BQ9GZU3 492 aa19.31■□□□□ 0.68
NUP50-213ENST00000461437 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
NUP50-213ENST00000461437 GNAI3P08754 354 aa19.3■□□□□ 0.68
NUP50-213ENST00000461437 TBC1D22AQ8WUA7 517 aa19.3■□□□□ 0.68
NUP50-213ENST00000461437 COPRSQ9NQ92 184 aa19.3■□□□□ 0.68
NUP50-213ENST00000461437 PPP2R3BQ9Y5P8 575 aa19.3■□□□□ 0.68
NUP50-213ENST00000461437 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 USP2O75604 605 aaPredicted RBP19.29■□□□□ 0.68
NUP50-213ENST00000461437 TBC1D8O95759 1140 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 IL15P40933 162 aaPredicted RBP19.29■□□□□ 0.68
NUP50-213ENST00000461437 TIMM10P62072 90 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 ZKSCAN2Q63HK3 967 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 MCOLN1Q9GZU1 580 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 C1orf115Q9H7X2 142 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 LAMB1P07942 1786 aa19.29■□□□□ 0.68
NUP50-213ENST00000461437 PRDX5P30044 214 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 TFCP2Q12800 502 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 DGKZQ13574 1117 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 DIXDC1Q155Q3 683 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 SPRYD7Q5W111 196 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 TEPSINQ96N21 525 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 SAGE1Q9NXZ1 904 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 FBXO3Q9UK99 471 aa19.28■□□□□ 0.68
NUP50-213ENST00000461437 PPP1R12BO60237 982 aaPredicted RBP19.27■□□□□ 0.68
NUP50-213ENST00000461437 MAP3K11Q16584 847 aa19.27■□□□□ 0.68
NUP50-213ENST00000461437 SUPT20HL1Q3ZLR7 823 aa19.27■□□□□ 0.68
NUP50-213ENST00000461437 HDAC5Q9UQL6 1122 aa19.27■□□□□ 0.68
NUP50-213ENST00000461437 GNAI2P04899 355 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 RLBP1P12271 317 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 GJA5P36382 358 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 TNFAIP1Q13829 316 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 CCDC102BQ68D86 513 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 APOBEC3HQ6NTF7 200 aaKnown RBP19.26■□□□□ 0.67
NUP50-213ENST00000461437 SLC10A4Q96EP9 437 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 WNK4Q96J92 1243 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 R3HDMLQ9H3Y0 253 aa19.26■□□□□ 0.67
NUP50-213ENST00000461437 CCDC85CA6NKD9 419 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 MTX1Q13505 466 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 WDR66Q8TBY9 1149 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 ZDHHC15Q96MV8 337 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 ELP3Q9H9T3 547 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
NUP50-213ENST00000461437 MYO5AQ9Y4I1 1855 aaKnown RBP19.24■□□□□ 0.67
NUP50-213ENST00000461437 A0A1B0GUL7 405 aa19.24■□□□□ 0.67
NUP50-213ENST00000461437 TM4SF4P48230 202 aa19.24■□□□□ 0.67
NUP50-213ENST00000461437 HDLBPQ00341 1268 aaKnown RBP19.24■□□□□ 0.67
NUP50-213ENST00000461437 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
NUP50-213ENST00000461437 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
NUP50-213ENST00000461437 TNNI2P48788 182 aa19.23■□□□□ 0.67
NUP50-213ENST00000461437 RASGRF1Q13972 1273 aa19.23■□□□□ 0.67
NUP50-213ENST00000461437 XAGE2Q96GT9 111 aa19.23■□□□□ 0.67
NUP50-213ENST00000461437 NEUROD6Q96NK8 337 aa19.23■□□□□ 0.67
NUP50-213ENST00000461437 MAST3O60307 1309 aa19.23■□□□□ 0.67
NUP50-213ENST00000461437 HHIPL2Q6UWX4 724 aa19.22■□□□□ 0.67
NUP50-213ENST00000461437 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
NUP50-213ENST00000461437 FTSJ3Q8IY81 847 aaKnown RBP19.22■□□□□ 0.67
NUP50-213ENST00000461437 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
NUP50-213ENST00000461437 GNL3LQ9NVN8 582 aaKnown RBP19.22■□□□□ 0.67
NUP50-213ENST00000461437 SUGT1Q9Y2Z0 365 aa19.22■□□□□ 0.67
NUP50-213ENST00000461437 IGF2BP3O00425 579 aaKnown RBP eCLIP19.21■□□□□ 0.67
NUP50-213ENST00000461437 SLC34A2O95436 690 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 LDHBP07195 334 aaKnown RBP19.21■□□□□ 0.67
NUP50-213ENST00000461437 SREBF2Q12772 1141 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 TCP10Q12799 353 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 NFIAQ12857 509 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 PI16Q6UXB8 463 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.21■□□□□ 0.67
NUP50-213ENST00000461437 ANKRD13AQ8IZ07 590 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 ZNF296Q8WUU4 475 aaPredicted RBP19.21■□□□□ 0.67
NUP50-213ENST00000461437 TMOD2Q9NZR1 351 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 DENND2AQ9ULE3 1009 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 DOCK2Q92608 1830 aa19.21■□□□□ 0.67
NUP50-213ENST00000461437 CDC42EP5Q6NZY7 148 aa19.2■□□□□ 0.66
NUP50-213ENST00000461437 OPTNQ96CV9 577 aa19.2■□□□□ 0.66
NUP50-213ENST00000461437 MRIQ9BWK5 157 aa19.2■□□□□ 0.66
NUP50-213ENST00000461437 ABCF2Q9UG63 623 aa19.2■□□□□ 0.66
NUP50-213ENST00000461437 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
NUP50-213ENST00000461437 VGLL4Q14135 290 aa19.19■□□□□ 0.66
NUP50-213ENST00000461437 MIGA2Q7L4E1 593 aa19.19■□□□□ 0.66
NUP50-213ENST00000461437 PANK1Q8TE04 598 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms