RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 SULF2Q8IWU5 870 aa10□□□□□ -0.81
CHL1-209ENST00000461289 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
CHL1-209ENST00000461289 SRA1Q9HD15 236 aaKnown RBP10□□□□□ -0.81
CHL1-209ENST00000461289 COPRSQ9NQ92 184 aa10□□□□□ -0.81
CHL1-209ENST00000461289 NME2P22392 152 aa9.99□□□□□ -0.81
CHL1-209ENST00000461289 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
CHL1-209ENST00000461289 TMEM74Q96NL1 305 aa9.99□□□□□ -0.81
CHL1-209ENST00000461289 EMILIN2Q9BXX0 1053 aa9.99□□□□□ -0.81
CHL1-209ENST00000461289 SOX17Q9H6I2 414 aaPredicted RBP9.99□□□□□ -0.81
CHL1-209ENST00000461289 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
CHL1-209ENST00000461289 MKL2Q9ULH7 1088 aa9.99□□□□□ -0.81
CHL1-209ENST00000461289 PAGE1O75459 146 aa9.98□□□□□ -0.81
CHL1-209ENST00000461289 CYP11A1P05108 521 aa9.98□□□□□ -0.81
CHL1-209ENST00000461289 HNRNPUQ00839 825 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHL1-209ENST00000461289 GNL2Q13823 731 aaKnown RBP9.98□□□□□ -0.81
CHL1-209ENST00000461289 LRRC14Q15048 493 aa9.98□□□□□ -0.81
CHL1-209ENST00000461289 KLHL23Q8NBE8 558 aa9.98□□□□□ -0.81
CHL1-209ENST00000461289 CORO1BQ9BR76 489 aa9.98□□□□□ -0.81
CHL1-209ENST00000461289 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
CHL1-209ENST00000461289 GNB5O14775 395 aa9.97□□□□□ -0.81
CHL1-209ENST00000461289 HGSNATQ68CP4 663 aa9.97□□□□□ -0.81
CHL1-209ENST00000461289 DTWD1Q8N5C7 304 aa9.97□□□□□ -0.81
CHL1-209ENST00000461289 ZSCAN1Q8NBB4 408 aa9.97□□□□□ -0.81
CHL1-209ENST00000461289 USP26Q9BXU7 913 aa9.97□□□□□ -0.81
CHL1-209ENST00000461289 ARNTP27540 789 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 NLRP12P59046 1061 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 RAD51AP2Q09MP3 1159 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 SUZ12Q15022 739 aaKnown RBP9.96□□□□□ -0.82
CHL1-209ENST00000461289 SNAP47Q5SQN1 464 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 LLGL2Q6P1M3 1020 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 KCNB2Q92953 911 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 KLHDC7BQ96G42 594 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 CAPN10Q9HC96 672 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 TLR6Q9Y2C9 796 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.82
CHL1-209ENST00000461289 RPS26P62854 115 aaKnown RBP9.95□□□□□ -0.82
CHL1-209ENST00000461289 SNRPNP63162 240 aaKnown RBP9.95□□□□□ -0.82
CHL1-209ENST00000461289 TRIM28Q13263 835 aaKnown RBP9.95□□□□□ -0.82
CHL1-209ENST00000461289 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 POU4F3Q15319 338 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 PHC3Q8NDX5 983 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 MIR1-1HGQ9H1L0 117 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 ACBD3Q9H3P7 528 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 CYP8B1Q9UNU6 501 aa9.95□□□□□ -0.82
CHL1-209ENST00000461289 ARHGEF15O94989 841 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
CHL1-209ENST00000461289 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
CHL1-209ENST00000461289 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 COL9A3Q14050 684 aaPredicted RBP9.94□□□□□ -0.82
CHL1-209ENST00000461289 PDE3AQ14432 1141 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 PRRT3Q5FWE3 981 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 HP1BP3Q5SSJ5 553 aaPredicted RBP9.94□□□□□ -0.82
CHL1-209ENST00000461289 AGMOQ6ZNB7 445 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
CHL1-209ENST00000461289 NOP53Q9NZM5 478 aaKnown RBP9.94□□□□□ -0.82
CHL1-209ENST00000461289 A0A0A0MRY4 1105 aa9.93□□□□□ -0.82
CHL1-209ENST00000461289 GSTP1P09211 210 aaKnown RBP9.93□□□□□ -0.82
CHL1-209ENST00000461289 HOXB4P17483 251 aaPredicted RBP9.93□□□□□ -0.82
CHL1-209ENST00000461289 MAOBP27338 520 aa9.93□□□□□ -0.82
CHL1-209ENST00000461289 RACK1P63244 317 aaKnown RBP9.93□□□□□ -0.82
CHL1-209ENST00000461289 NAALADL2Q58DX5 795 aa9.93□□□□□ -0.82
CHL1-209ENST00000461289 MAP1SQ66K74 1059 aaPredicted RBP9.93□□□□□ -0.82
CHL1-209ENST00000461289 TRIM11Q96F44 468 aa9.93□□□□□ -0.82
CHL1-209ENST00000461289 C8orf37Q96NL8 207 aa9.93□□□□□ -0.82
CHL1-209ENST00000461289 ZC3H12CQ9C0D7 883 aaKnown RBP9.93□□□□□ -0.82
CHL1-209ENST00000461289 PF4P02776 101 aa9.92□□□□□ -0.82
CHL1-209ENST00000461289 LMNB2Q03252 620 aa9.92□□□□□ -0.82
CHL1-209ENST00000461289 BEND7Q8N7W2 519 aaPredicted RBP9.92□□□□□ -0.82
CHL1-209ENST00000461289 GALNT11Q8NCW6 608 aa9.92□□□□□ -0.82
CHL1-209ENST00000461289 STK35Q8TDR2 534 aa9.92□□□□□ -0.82
CHL1-209ENST00000461289 SUPT16HQ9Y5B9 1047 aaKnown RBP9.92□□□□□ -0.82
CHL1-209ENST00000461289 DEAF1O75398 565 aaPredicted RBP9.91□□□□□ -0.82
CHL1-209ENST00000461289 TFE3P19532 575 aaPredicted RBP9.91□□□□□ -0.82
CHL1-209ENST00000461289 BMP6P22004 513 aa9.91□□□□□ -0.82
CHL1-209ENST00000461289 CAMK2GQ13555 558 aaPredicted RBP9.91□□□□□ -0.82
CHL1-209ENST00000461289 LINC00114Q6XXX2 140 aa9.91□□□□□ -0.82
CHL1-209ENST00000461289 FBXO11Q86XK2 927 aa9.91□□□□□ -0.82
CHL1-209ENST00000461289 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
CHL1-209ENST00000461289 GOLM1Q8NBJ4 401 aa9.91□□□□□ -0.82
CHL1-209ENST00000461289 JARID2Q92833 1246 aaPredicted RBP9.91□□□□□ -0.82
CHL1-209ENST00000461289 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.82
CHL1-209ENST00000461289 DUOXA2Q1HG44 320 aa9.9□□□□□ -0.82
CHL1-209ENST00000461289 VPS37DQ86XT2 251 aa9.9□□□□□ -0.82
CHL1-209ENST00000461289 GRIN3AQ8TCU5 1115 aa9.9□□□□□ -0.82
CHL1-209ENST00000461289 ZNF296Q8WUU4 475 aaPredicted RBP9.9□□□□□ -0.82
CHL1-209ENST00000461289 RHOVQ96L33 236 aa9.9□□□□□ -0.82
CHL1-209ENST00000461289 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.82
CHL1-209ENST00000461289 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
CHL1-209ENST00000461289 BPNT1O95861 308 aa9.89□□□□□ -0.83
CHL1-209ENST00000461289 TNNI2P48788 182 aa9.89□□□□□ -0.83
CHL1-209ENST00000461289 PAK2Q13177 524 aa9.89□□□□□ -0.83
CHL1-209ENST00000461289 SEPT6Q14141 434 aa9.89□□□□□ -0.83
CHL1-209ENST00000461289 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
CHL1-209ENST00000461289 LOC100996750A0A140TA64 210 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 FOXD4L6Q3SYB3 417 aaPredicted RBP9.88□□□□□ -0.83
CHL1-209ENST00000461289 RASIP1Q5U651 963 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 FOXD4L3Q6VB84 417 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms