RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SLC5A1P13866 664 aa16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ATG9AQ7Z3C6 839 aa16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 RASAL3Q86YV0 1011 aa16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ZNF646O15015 1829 aaPredicted RBP16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 POLA2Q14181 598 aa16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ZIC5Q96T25 663 aa16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 AKAP2Q9Y2D5 859 aa16.36■□□□□ 0.21
RAB11FIP3-207ENST00000461009 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 HMMRO75330 724 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 TRPA1O75762 1119 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 TNNI2P48788 182 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 OS9Q13438 667 aaPredicted RBP16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PRKG1Q13976 671 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 MOB2Q70IA6 237 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 LPIN2Q92539 896 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 GNL3LQ9NVN8 582 aaKnown RBP16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 RNF186Q9NXI6 227 aa16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
RAB11FIP3-207ENST00000461009 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SREBF2Q12772 1141 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 CEP85Q6P2H3 762 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SLC10A4Q96EP9 437 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SUGT1Q9Y2Z0 365 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 MAST3O60307 1309 aa16.34■□□□□ 0.21
RAB11FIP3-207ENST00000461009 FGFR2P21802 821 aa16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 CRKP46108 304 aa16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 IREB2P48200 963 aaKnown RBP16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 BCAMP50895 628 aa16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ABHD8Q96I13 439 aa16.33■□□□□ 0.2
RAB11FIP3-207ENST00000461009 RASA3Q14644 834 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 HSP90AB4PQ58FF6 505 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 MRIQ9BWK5 157 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TFCP2Q12800 502 aa16.31■□□□□ 0.2
RAB11FIP3-207ENST00000461009 LDLRAD1Q5T700 205 aa16.31■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
RAB11FIP3-207ENST00000461009 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ECM29Q5VYK3 1845 aa16.31■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TM4SF4P48230 202 aa16.3■□□□□ 0.2
RAB11FIP3-207ENST00000461009 INHBEP58166 350 aa16.3■□□□□ 0.2
RAB11FIP3-207ENST00000461009 DGKZQ13574 1117 aa16.3■□□□□ 0.2
RAB11FIP3-207ENST00000461009 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
RAB11FIP3-207ENST00000461009 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
RAB11FIP3-207ENST00000461009 NBPF12Q5TAG4 269 aaPredicted RBP16.29■□□□□ 0.2
RAB11FIP3-207ENST00000461009 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
RAB11FIP3-207ENST00000461009 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
RAB11FIP3-207ENST00000461009 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
RAB11FIP3-207ENST00000461009 MANSC4A6NHS7 340 aaPredicted RBP16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 CCDC85CA6NKD9 419 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TCP10L2B9ZVM9 353 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 SEMA3EO15041 775 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ZBTB48P10074 688 aaPredicted RBP16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 TIMM10P62072 90 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 AAMPQ13685 434 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 GORABQ5T7V8 394 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 SPRYD7Q5W111 196 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ZDHHC15Q96MV8 337 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 MCOLN1Q9GZU1 580 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 GPR108Q9NPR9 543 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 DENND2AQ9ULE3 1009 aa16.28■□□□□ 0.2
RAB11FIP3-207ENST00000461009 A0A1B0GUL7 405 aa16.27■□□□□ 0.2
RAB11FIP3-207ENST00000461009 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
RAB11FIP3-207ENST00000461009 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.2
RAB11FIP3-207ENST00000461009 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
RAB11FIP3-207ENST00000461009 CASP8AP2Q9UKL3 1982 aa16.27■□□□□ 0.19
RAB11FIP3-207ENST00000461009 ARAP2Q8WZ64 1704 aa16.26■□□□□ 0.19
RAB11FIP3-207ENST00000461009 RAB11FIP3O75154 756 aa16.26■□□□□ 0.19
RAB11FIP3-207ENST00000461009 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
RAB11FIP3-207ENST00000461009 CRBNQ96SW2 442 aa16.26■□□□□ 0.19
RAB11FIP3-207ENST00000461009 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
RAB11FIP3-207ENST00000461009 USP2O75604 605 aaPredicted RBP16.25■□□□□ 0.19
RAB11FIP3-207ENST00000461009 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
RAB11FIP3-207ENST00000461009 FKBP1CQ5VVH2 108 aa16.25■□□□□ 0.19
RAB11FIP3-207ENST00000461009 SIRT2Q8IXJ6 389 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms