RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 IFIT2P09913 472 aaKnown RBP22.54■■□□□ 1.2
DDR1-241ENST00000460944 CRKP46108 304 aa22.54■■□□□ 1.2
DDR1-241ENST00000460944 GRIK5Q16478 980 aa22.54■■□□□ 1.2
DDR1-241ENST00000460944 SPTY2D1Q68D10 685 aaPredicted RBP22.54■■□□□ 1.2
DDR1-241ENST00000460944 EXOC6Q8TAG9 804 aa22.54■■□□□ 1.2
DDR1-241ENST00000460944 TEKT1Q969V4 418 aa22.54■■□□□ 1.2
DDR1-241ENST00000460944 ZBED3Q96IU2 234 aaPredicted RBP22.54■■□□□ 1.2
DDR1-241ENST00000460944 HMG20BQ9P0W2 317 aa22.54■■□□□ 1.2
DDR1-241ENST00000460944 ABCF2Q9UG63 623 aa22.54■■□□□ 1.2
DDR1-241ENST00000460944 SPDYE2BA6NHP3 402 aa22.53■■□□□ 1.2
DDR1-241ENST00000460944 TRAF5O00463 557 aa22.53■■□□□ 1.2
DDR1-241ENST00000460944 SPDYE6P0CI01 402 aa22.53■■□□□ 1.2
DDR1-241ENST00000460944 USP48Q86UV5 1035 aa22.53■■□□□ 1.2
DDR1-241ENST00000460944 ZNF512BQ96KM6 892 aaPredicted RBP22.53■■□□□ 1.2
DDR1-241ENST00000460944 AKAP11Q9UKA4 1901 aa22.53■■□□□ 1.2
DDR1-241ENST00000460944 PRDX5P30044 214 aa22.52■■□□□ 1.2
DDR1-241ENST00000460944 MCAMP43121 646 aa22.52■■□□□ 1.2
DDR1-241ENST00000460944 APOBEC3FQ8IUX4 373 aaKnown RBP22.52■■□□□ 1.2
DDR1-241ENST00000460944 ADM5C9JUS6 153 aa22.51■■□□□ 1.19
DDR1-241ENST00000460944 PI16Q6UXB8 463 aa22.51■■□□□ 1.19
DDR1-241ENST00000460944 DZIP1Q86YF9 867 aaKnown RBP22.51■■□□□ 1.19
DDR1-241ENST00000460944 MRIQ9BWK5 157 aa22.51■■□□□ 1.19
DDR1-241ENST00000460944 PCDHAC2Q9Y5I4 1007 aa22.51■■□□□ 1.19
DDR1-241ENST00000460944 TMEM88BA6NKF7 163 aa22.5■■□□□ 1.19
DDR1-241ENST00000460944 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
DDR1-241ENST00000460944 HHIPL2Q6UWX4 724 aa22.5■■□□□ 1.19
DDR1-241ENST00000460944 ERICH6Q7L0X2 663 aa22.5■■□□□ 1.19
DDR1-241ENST00000460944 PRMT6Q96LA8 375 aaPredicted RBP22.5■■□□□ 1.19
DDR1-241ENST00000460944 ZNF408Q9H9D4 720 aa22.5■■□□□ 1.19
DDR1-241ENST00000460944 CREBZFQ9NS37 354 aa22.5■■□□□ 1.19
DDR1-241ENST00000460944 MYH2Q9UKX2 1941 aa22.5■■□□□ 1.19
DDR1-241ENST00000460944 IRX6P78412 446 aaPredicted RBP22.49■■□□□ 1.19
DDR1-241ENST00000460944 SLF2Q8IX21 1173 aa22.49■■□□□ 1.19
DDR1-241ENST00000460944 SNRKQ9NRH2 765 aa22.49■■□□□ 1.19
DDR1-241ENST00000460944 ZBTB47Q9UFB7 747 aaPredicted RBP22.49■■□□□ 1.19
DDR1-241ENST00000460944 CLRN2A0PK11 232 aa22.48■■□□□ 1.19
DDR1-241ENST00000460944 SMARCA5O60264 1052 aaPredicted RBP22.48■■□□□ 1.19
DDR1-241ENST00000460944 CELF2O95319 508 aaKnown RBP22.48■■□□□ 1.19
DDR1-241ENST00000460944 FMR1Q06787 632 aaKnown RBP eCLIP22.48■■□□□ 1.193e-7■■■□□ 15.5
DDR1-241ENST00000460944 ZDHHC15Q96MV8 337 aa22.48■■□□□ 1.19
DDR1-241ENST00000460944 VEZTQ9HBM0 779 aa22.48■■□□□ 1.19
DDR1-241ENST00000460944 DIXDC1Q155Q3 683 aa22.47■■□□□ 1.19
DDR1-241ENST00000460944 RWDD1Q9H446 243 aaPredicted RBP22.47■■□□□ 1.19
DDR1-241ENST00000460944 TDRD3Q9H7E2 651 aaKnown RBP22.47■■□□□ 1.19
DDR1-241ENST00000460944 TMOD2Q9NZR1 351 aa22.47■■□□□ 1.19
DDR1-241ENST00000460944 RAI14Q9P0K7 980 aa22.47■■□□□ 1.19
DDR1-241ENST00000460944 LRP2BPQ9P2M1 347 aa22.47■■□□□ 1.19
DDR1-241ENST00000460944 ZAP70P43403 619 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 HTRA3P83110 453 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 TNFAIP1Q13829 316 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 SPDYE2Q495Y8 402 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 TBC1D9Q6ZT07 1266 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 GCC1Q96CN9 775 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 CDCA5Q96FF9 252 aa22.46■■□□□ 1.19
DDR1-241ENST00000460944 ZNF70Q9UC06 446 aaPredicted RBP22.46■■□□□ 1.19
DDR1-241ENST00000460944 SCAF8Q9UPN6 1271 aaKnown RBP22.46■■□□□ 1.19
DDR1-241ENST00000460944 GSTO1P78417 241 aa22.45■■□□□ 1.18
DDR1-241ENST00000460944 GPATCH3Q96I76 525 aa22.45■■□□□ 1.18
DDR1-241ENST00000460944 ABT1Q9ULW3 272 aaKnown RBP22.45■■□□□ 1.18
DDR1-241ENST00000460944 DAGLAQ9Y4D2 1042 aa22.45■■□□□ 1.18
DDR1-241ENST00000460944 MAST2Q6P0Q8 1798 aa22.45■■□□□ 1.18
DDR1-241ENST00000460944 CYP2E1P05181 493 aaPredicted RBP22.44■■□□□ 1.18
DDR1-241ENST00000460944 AOX1Q06278 1338 aa22.44■■□□□ 1.18
DDR1-241ENST00000460944 DLK2Q6UY11 383 aa22.44■■□□□ 1.18
DDR1-241ENST00000460944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.44■■□□□ 1.18
DDR1-241ENST00000460944 PPP2R3BQ9Y5P8 575 aa22.44■■□□□ 1.18
DDR1-241ENST00000460944 MYO5AQ9Y4I1 1855 aaKnown RBP22.43■■□□□ 1.18
DDR1-241ENST00000460944 IGSF3O75054 1194 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 LDHCP07864 332 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 NF2P35240 595 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 TNNI2P48788 182 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 MECOMQ03112 1051 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 CST9Q5W186 159 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 APOBEC3HQ6NTF7 200 aaKnown RBP22.43■■□□□ 1.18
DDR1-241ENST00000460944 DEFB129Q9H1M3 183 aa22.43■■□□□ 1.18
DDR1-241ENST00000460944 NSUN4Q96CB9 384 aaKnown RBP22.42■■□□□ 1.18
DDR1-241ENST00000460944 MROH7-TTC4A0A0A0MT08 1334 aa22.41■■□□□ 1.18
DDR1-241ENST00000460944 GAKO14976 1311 aa22.41■■□□□ 1.18
DDR1-241ENST00000460944 TTF1Q15361 905 aaPredicted RBP22.41■■□□□ 1.18
DDR1-241ENST00000460944 C2orf69Q8N8R5 385 aa22.41■■□□□ 1.18
DDR1-241ENST00000460944 FAM163AQ96GL9 167 aaPredicted RBP22.41■■□□□ 1.18
DDR1-241ENST00000460944 DNAJC2Q99543 621 aaKnown RBP22.41■■□□□ 1.18
DDR1-241ENST00000460944 GBA2Q9HCG7 927 aaPredicted RBP22.41■■□□□ 1.18
DDR1-241ENST00000460944 TCP10L2B9ZVM9 353 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 ATP5JP18859 108 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 ANKRD45Q5TZF3 282 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 PRAMEF18Q5VWM3 479 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
DDR1-241ENST00000460944 ECHDC1Q9NTX5 307 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 NDUFB9Q9Y6M9 179 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 DOCK2Q92608 1830 aa22.4■■□□□ 1.18
DDR1-241ENST00000460944 IDH1O75874 414 aaKnown RBP22.39■■□□□ 1.17
DDR1-241ENST00000460944 BTDP43251 543 aa22.39■■□□□ 1.17
DDR1-241ENST00000460944 RASA3Q14644 834 aa22.39■■□□□ 1.17
DDR1-241ENST00000460944 FKBP1CQ5VVH2 108 aa22.39■■□□□ 1.17
DDR1-241ENST00000460944 NAA16Q6N069 864 aaPredicted RBP22.39■■□□□ 1.17
DDR1-241ENST00000460944 NOL10Q9BSC4 688 aaKnown RBP22.39■■□□□ 1.17
DDR1-241ENST00000460944 BOLA2Q9H3K6 86 aa22.39■■□□□ 1.17
DDR1-241ENST00000460944 USP40Q9NVE5 1235 aa22.39■■□□□ 1.17
DDR1-241ENST00000460944 TLL2Q9Y6L7 1015 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms