RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
UPF2-204ENST00000460569 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
UPF2-204ENST00000460569 GMLQ99445 158 aa12.33□□□□□ -0.44
UPF2-204ENST00000460569 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
UPF2-204ENST00000460569 TTF2Q9UNY4 1162 aaKnown RBP12.33□□□□□ -0.44
UPF2-204ENST00000460569 WDR90Q96KV7 1748 aa12.33□□□□□ -0.44
UPF2-204ENST00000460569 SCN4AP35499 1836 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 ECM29Q5VYK3 1845 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 SDSP20132 328 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 SCNN1DP51172 638 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 MECOMQ03112 1051 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 BMP2KLQ5H9B9 411 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 HDAC9Q9UKV0 1011 aa12.32□□□□□ -0.44
UPF2-204ENST00000460569 RFX7Q2KHR2 1363 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 USP17L8P0C7I0 530 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 PDE6AP16499 860 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
UPF2-204ENST00000460569 GSTO1P78417 241 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 LRRFIP1Q32MZ4 808 aaKnown RBP12.31□□□□□ -0.44
UPF2-204ENST00000460569 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 NAA16Q6N069 864 aaPredicted RBP12.31□□□□□ -0.44
UPF2-204ENST00000460569 ZSCAN25Q6NSZ9 544 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 OGFOD1Q8N543 542 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 MAGEB6Q8N7X4 407 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 DPF2Q92785 391 aa12.31□□□□□ -0.44
UPF2-204ENST00000460569 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
UPF2-204ENST00000460569 SHTN1A0MZ66 631 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 IGSF3O75054 1194 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 CYP7A1P22680 504 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 RBM5P52756 815 aaKnown RBP eCLIP12.3□□□□□ -0.44
UPF2-204ENST00000460569 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 TEKT1Q969V4 418 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
UPF2-204ENST00000460569 GPRC5DQ9NZD1 345 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
UPF2-204ENST00000460569 MROH7-TTC4A0A0A0MT08 1334 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 ZNF532Q9HCE3 1301 aa12.3□□□□□ -0.44
UPF2-204ENST00000460569 H7C1D1 291 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 RNF113AO15541 343 aaKnown RBP12.29□□□□□ -0.44
UPF2-204ENST00000460569 CHGBP05060 677 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
UPF2-204ENST00000460569 ADD2P35612 726 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 CRKP46108 304 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
UPF2-204ENST00000460569 ZNF384Q8TF68 577 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
UPF2-204ENST00000460569 LDHCP07864 332 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 EPS15P42566 896 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 ZNF280AP59817 542 aaPredicted RBP12.28□□□□□ -0.44
UPF2-204ENST00000460569 HDLBPQ00341 1268 aaKnown RBP12.28□□□□□ -0.44
UPF2-204ENST00000460569 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 SLFNL1Q499Z3 407 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 NOL10Q9BSC4 688 aaKnown RBP12.28□□□□□ -0.44
UPF2-204ENST00000460569 MYOZ2Q9NPC6 264 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 DAGLAQ9Y4D2 1042 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 GAKO14976 1311 aa12.28□□□□□ -0.44
UPF2-204ENST00000460569 TCRBV5S4A2TA0A5A2 114 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 IQCA1LA6NCM1 817 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 HIP1O00291 1037 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 MMP14P50281 582 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 DLGAP5Q15398 846 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
UPF2-204ENST00000460569 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
UPF2-204ENST00000460569 TMED8Q6PL24 325 aaPredicted RBP12.27□□□□□ -0.45
UPF2-204ENST00000460569 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 ADGRA1Q86SQ6 560 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 APPBP2Q92624 585 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 FOCADQ5VW36 1801 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 NAV1Q8NEY1 1877 aa12.27□□□□□ -0.45
UPF2-204ENST00000460569 A0A0D9SFI3 127 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 CDC45O75419 566 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 EPHX2P34913 555 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 BTDP43251 543 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 NMIQ13287 307 aaPredicted RBP12.26□□□□□ -0.45
UPF2-204ENST00000460569 ZMYM1Q5SVZ6 1142 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 TICAM2Q86XR7 235 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 TRPM4Q8TD43 1214 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
UPF2-204ENST00000460569 ADARB2Q9NS39 739 aaKnown RBP12.26□□□□□ -0.45
UPF2-204ENST00000460569 AATFQ9NY61 560 aaKnown RBP eCLIP12.26□□□□□ -0.45
UPF2-204ENST00000460569 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
UPF2-204ENST00000460569 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
UPF2-204ENST00000460569 M0R2C6 588 aa12.25□□□□□ -0.45
UPF2-204ENST00000460569 MBD4O95243 580 aa12.25□□□□□ -0.45
UPF2-204ENST00000460569 BAG3O95817 575 aa12.25□□□□□ -0.45
UPF2-204ENST00000460569 EGFRP00533 1210 aa12.25□□□□□ -0.45
UPF2-204ENST00000460569 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms