RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 ADORA1P30542 326 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 PBX2P40425 430 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 GYG1P46976 350 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 PDE1AP54750 535 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 AOC3Q16853 763 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 PODNQ7Z5L7 613 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 OSBPL3Q9H4L5 887 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-202ENST00000460514 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 DENND2AQ9ULE3 1009 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-202ENST00000460514 IL1R1P14778 569 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 ARID4AP29374 1257 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-202ENST00000460514 PHKA1P46020 1223 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 BCAMP50895 628 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 PLEKHM2Q8IWE5 1019 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 C16orf71Q8IYS4 520 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-202ENST00000460514 ZGPATQ8N5A5 531 aaKnown RBP9.24□□□□□ -0.93
ABCA4-202ENST00000460514 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-202ENST00000460514 CD209Q9NNX6 404 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
ABCA4-202ENST00000460514 PDS5AQ29RF7 1337 aaKnown RBP9.24□□□□□ -0.93
ABCA4-202ENST00000460514 IRS2Q9Y4H2 1338 aa9.24□□□□□ -0.93
ABCA4-202ENST00000460514 WTIPA6NIX2 430 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-202ENST00000460514 ECE2O60344 883 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 IGSF3O75054 1194 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 KLRK1P26718 216 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 RGS3P49796 1198 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 RASSF7Q02833 373 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 TTF1Q15361 905 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-202ENST00000460514 LRRFIP1Q32MZ4 808 aaKnown RBP9.23□□□□□ -0.93
ABCA4-202ENST00000460514 TXNRD3Q86VQ6 643 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 SPATA5Q8NB90 893 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 TDRD7Q8NHU6 1098 aaKnown RBP9.23□□□□□ -0.93
ABCA4-202ENST00000460514 WDR66Q8TBY9 1149 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 TBC1D22AQ8WUA7 517 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 SALL3Q9BXA9 1300 aa9.23□□□□□ -0.93
ABCA4-202ENST00000460514 PDE4AP27815 886 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 EIF6P56537 245 aaKnown RBP9.22□□□□□ -0.93
ABCA4-202ENST00000460514 RASGRF1Q13972 1273 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 TNIP1Q15025 636 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-202ENST00000460514 Q6ZNB5 142 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 HS6ST3Q8IZP7 471 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 CNTROBQ8N137 903 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-202ENST00000460514 HAUS7Q99871 368 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 BOLA2Q9H3K6 86 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 DBNDD1Q9H9R9 158 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 STK24Q9Y6E0 443 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 CHD4Q14839 1912 aa9.22□□□□□ -0.93
ABCA4-202ENST00000460514 ZC3H4Q9UPT8 1303 aaKnown RBP9.22□□□□□ -0.93
ABCA4-202ENST00000460514 MYH13Q9UKX3 1938 aa9.21□□□□□ -0.93
ABCA4-202ENST00000460514 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 MCAMP43121 646 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.94
ABCA4-202ENST00000460514 CHAF1AQ13111 956 aaPredicted RBP9.21□□□□□ -0.94
ABCA4-202ENST00000460514 TTC22Q5TAA0 569 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 TTLL5Q6EMB2 1281 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 TMED8Q6PL24 325 aaPredicted RBP9.21□□□□□ -0.94
ABCA4-202ENST00000460514 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 TICAM2Q86XR7 235 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 PI4K2BQ8TCG2 481 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.94
ABCA4-202ENST00000460514 PAG1Q9NWQ8 432 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 HMG20BQ9P0W2 317 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
ABCA4-202ENST00000460514 SUGT1Q9Y2Z0 365 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 FAM205AQ6ZU69 1335 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 MYO3BQ8WXR4 1341 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 SALL1Q9NSC2 1324 aa9.21□□□□□ -0.94
ABCA4-202ENST00000460514 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 MMP14P50281 582 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 GTF2IP78347 998 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 MAP3K12Q12852 859 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 BMP2KLQ5H9B9 411 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 C9orf131Q5VYM1 1079 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 ZSCAN25Q6NSZ9 544 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCA4-202ENST00000460514 DICER1Q9UPY3 1922 aaKnown RBP9.2□□□□□ -0.94
ABCA4-202ENST00000460514 MAST3O60307 1309 aa9.2□□□□□ -0.94
ABCA4-202ENST00000460514 SBF1O95248 1867 aa9.19□□□□□ -0.94
ABCA4-202ENST00000460514 CCDC88AQ3V6T2 1871 aa9.19□□□□□ -0.94
ABCA4-202ENST00000460514 FZD9O00144 591 aa9.19□□□□□ -0.94
ABCA4-202ENST00000460514 HIP1O00291 1037 aa9.19□□□□□ -0.94
ABCA4-202ENST00000460514 GOLIM4O00461 696 aa9.19□□□□□ -0.94
ABCA4-202ENST00000460514 LDHBP07195 334 aaKnown RBP9.19□□□□□ -0.94
ABCA4-202ENST00000460514 ZAP70P43403 619 aa9.19□□□□□ -0.94
ABCA4-202ENST00000460514 SCARF1Q14162 830 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms