RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	LAMB2	P55268	1798 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	GNAT3	A8MTJ3	354 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	FMNL1	O95466	1100 aa	Predicted RBP	10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	GTF2A2	P52657	109 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	TTLL7	Q6ZT98	887 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	FBXO22	Q8NEZ5	403 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	DEFB129	Q9H1M3	183 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	ZBTB3	Q9H5J0	574 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	ELP3	Q9H9T3	547 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	ADGRA2	Q96PE1	1338 aa		10.83	□□□□□ -0.68
NCSTN-209	ENST00000459963	USP17L3	A6NCW0	530 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	USP17L4	A6NCW7	530 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	HCLS1	P14317	486 aa	Predicted RBP	10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	PRKCZ	Q05513	592 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	TMEM31	Q5JXX7	168 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	C17orf99	Q6UX52	265 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	USP17L1	Q7RTZ2	530 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	NBPF3	Q9H094	633 aa		10.82	□□□□□ -0.68
NCSTN-209	ENST00000459963	PSME4	Q14997	1843 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	CEMIP	Q8WUJ3	1361 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	USP2	O75604	605 aa	Predicted RBP	10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	INHA	P05111	366 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	MRPS5	P82675	430 aa	Known RBP	10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	SUPT20HL1	Q3ZLR7	823 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	IL27	Q8NEV9	243 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	C11orf49	Q9H6J7	331 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	ZCCHC17	Q9NP64	241 aa	Known RBP	10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	THEG	Q9P2T0	379 aa		10.81	□□□□□ -0.68
NCSTN-209	ENST00000459963	HS6ST3	Q8IZP7	471 aa		10.8	□□□□□ -0.68
NCSTN-209	ENST00000459963	CELF1	Q92879	486 aa	Known RBP	10.8	□□□□□ -0.68
NCSTN-209	ENST00000459963	EPHX3	Q9H6B9	360 aa		10.8	□□□□□ -0.68
NCSTN-209	ENST00000459963	PLSCR2	Q9NRY7	297 aa		10.8	□□□□□ -0.68
NCSTN-209	ENST00000459963	PPP2R3B	Q9Y5P8	575 aa		10.8	□□□□□ -0.68
NCSTN-209	ENST00000459963	ADCY3	O60266	1144 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	UFL1	O94874	794 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	MMP14	P50281	582 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	FOXK2	Q01167	660 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	ZNF710	Q8N1W2	664 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	PODXL2	Q9NZ53	605 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	CPA4	Q9UI42	421 aa		10.79	□□□□□ -0.68
NCSTN-209	ENST00000459963	BTBD19	C9JJ37	291 aa		10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	ELN	P15502	786 aa		10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	SMAD3	P84022	425 aa	Known RBP	10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	PODN	Q7Z5L7	613 aa		10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	PXYLP1	Q8TE99	480 aa		10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	NECAB3	Q96P71	396 aa	Predicted RBP	10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	MXD3	Q9BW11	206 aa		10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	GABRQ	Q9UN88	632 aa		10.78	□□□□□ -0.68
NCSTN-209	ENST00000459963	MUC6	Q6W4X9	2439 aa		10.77	□□□□□ -0.68
NCSTN-209	ENST00000459963	EMP3	P54852	163 aa		10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	GAS2L2	Q8NHY3	880 aa		10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	ZBED3	Q96IU2	234 aa	Predicted RBP	10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	GGA1	Q9UJY5	639 aa		10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	MYO3B	Q8WXR4	1341 aa		10.77	□□□□□ -0.69
NCSTN-209	ENST00000459963	GPR37L1	O60883	481 aa		10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	CETP	P11597	493 aa		10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	FCGRT	P55899	365 aa		10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	DACT2	Q5SW24	774 aa		10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	RRP7A	Q9Y3A4	280 aa	Known RBP	10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	OTOF	Q9HC10	1997 aa		10.76	□□□□□ -0.69
NCSTN-209	ENST00000459963	DDX60L	Q5H9U9	1706 aa	Known RBP	10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	MYL6B	P14649	208 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	GRIN2C	Q14957	1233 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	PPM1E	Q8WY54	764 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	MARVELD3	Q96A59	401 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	C11orf16	Q9NQ32	467 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	ANKIB1	Q9P2G1	1089 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	ZNF804B	A4D1E1	1349 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	PFAS	O15067	1338 aa		10.75	□□□□□ -0.69
NCSTN-209	ENST00000459963	COL4A1	P02462	1669 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	FLT3LG	P49771	235 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	NHLH1	Q02575	133 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	SHH	Q15465	462 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	MTMR14	Q8NCE2	650 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	TRMT112	Q9UI30	125 aa	Known RBP	10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	BDP1	A6H8Y1	2624 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	SH3TC1	Q8TE82	1336 aa		10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	COL3A1	P02461	1466 aa	Predicted RBP	10.74	□□□□□ -0.69
NCSTN-209	ENST00000459963	IRF5	Q13568	498 aa		10.73	□□□□□ -0.69
NCSTN-209	ENST00000459963	VGLL4	Q14135	290 aa		10.73	□□□□□ -0.69
NCSTN-209	ENST00000459963	FBXW7	Q969H0	707 aa		10.73	□□□□□ -0.69
NCSTN-209	ENST00000459963	NCOR1	O75376	2440 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	FAM86C2P	A6NEL3	165 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	BMP1	P13497	986 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	RPS8	P62241	208 aa	Known RBP	10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	SF3B3	Q15393	1217 aa	Known RBP	10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	LRRC26	Q2I0M4	334 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	STRIP1	Q5VSL9	837 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	POTEE	Q6S8J3	1075 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	MORC1	Q86VD1	984 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	NLRP10	Q86W26	655 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	KIAA0825	Q8IV33	1275 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	CDAN1	Q8IWY9	1227 aa		10.72	□□□□□ -0.69
NCSTN-209	ENST00000459963	SPDYE5	A6NIY4	337 aa		10.71	□□□□□ -0.69
NCSTN-209	ENST00000459963	SMIM22	K7EJ46	135 aa		10.71	□□□□□ -0.69

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