RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
TRIM39-211ENST00000458516 LRP2BPQ9P2M1 347 aa20.44■□□□□ 0.86
TRIM39-211ENST00000458516 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
TRIM39-211ENST00000458516 SHTN1A0MZ66 631 aa20.43■□□□□ 0.86
TRIM39-211ENST00000458516 IDH1O75874 414 aaKnown RBP20.43■□□□□ 0.86
TRIM39-211ENST00000458516 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
TRIM39-211ENST00000458516 TRIM6-TRIM34B2RNG4 842 aa20.42■□□□□ 0.86
TRIM39-211ENST00000458516 MECOMQ03112 1051 aa20.42■□□□□ 0.86
TRIM39-211ENST00000458516 DZIP1Q86YF9 867 aaKnown RBP20.42■□□□□ 0.86
TRIM39-211ENST00000458516 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
TRIM39-211ENST00000458516 NSUN4Q96CB9 384 aaKnown RBP20.42■□□□□ 0.86
TRIM39-211ENST00000458516 GPRC5DQ9NZD1 345 aa20.42■□□□□ 0.86
TRIM39-211ENST00000458516 MAST3O60307 1309 aa20.42■□□□□ 0.86
TRIM39-211ENST00000458516 IGSF3O75054 1194 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 SDSP20132 328 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
TRIM39-211ENST00000458516 MAP3K12Q12852 859 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 BMP2KLQ5H9B9 411 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 MICALL2Q8IY33 904 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 FSD1Q9BTV5 496 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
TRIM39-211ENST00000458516 RFX7Q2KHR2 1363 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 CDK5RAP2Q96SN8 1893 aa20.41■□□□□ 0.86
TRIM39-211ENST00000458516 DIXDC1Q155Q3 683 aa20.4■□□□□ 0.86
TRIM39-211ENST00000458516 CHGBP05060 677 aa20.39■□□□□ 0.85
TRIM39-211ENST00000458516 PDE6AP16499 860 aa20.39■□□□□ 0.85
TRIM39-211ENST00000458516 ADD2P35612 726 aa20.39■□□□□ 0.85
TRIM39-211ENST00000458516 EPS15P42566 896 aa20.39■□□□□ 0.85
TRIM39-211ENST00000458516 HDLBPQ00341 1268 aaKnown RBP20.39■□□□□ 0.85
TRIM39-211ENST00000458516 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
TRIM39-211ENST00000458516 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.39■□□□□ 0.85
TRIM39-211ENST00000458516 HDAC9Q9UKV0 1011 aa20.39■□□□□ 0.85
TRIM39-211ENST00000458516 GAKO14976 1311 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 TCRBV5S4A2TA0A5A2 114 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 POTECB2RU33 542 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 LMOD1P29536 600 aaPredicted RBP20.38■□□□□ 0.85
TRIM39-211ENST00000458516 CRKP46108 304 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 MMP14P50281 582 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 SLFNL1Q499Z3 407 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 SLC9C2Q5TAH2 1124 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 NAA16Q6N069 864 aaPredicted RBP20.38■□□□□ 0.85
TRIM39-211ENST00000458516 OGFOD1Q8N543 542 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 MRIQ9BWK5 157 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 SERPINA10Q9UK55 444 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 DAGLAQ9Y4D2 1042 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 PCDHAC2Q9Y5I4 1007 aa20.38■□□□□ 0.85
TRIM39-211ENST00000458516 FOCADQ5VW36 1801 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 MROH7-TTC4A0A0A0MT08 1334 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 EGFRP00533 1210 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 GSTO1P78417 241 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 CFAP100Q494V2 611 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 ZSCAN25Q6NSZ9 544 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 TMED8Q6PL24 325 aaPredicted RBP20.37■□□□□ 0.85
TRIM39-211ENST00000458516 HHIPL2Q6UWX4 724 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 ADGRA1Q86SQ6 560 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 TEKT1Q969V4 418 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 FAM163AQ96GL9 167 aaPredicted RBP20.37■□□□□ 0.85
TRIM39-211ENST00000458516 MYOZ2Q9NPC6 264 aa20.37■□□□□ 0.85
TRIM39-211ENST00000458516 H7C1D1 291 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
TRIM39-211ENST00000458516 CYP7A1P22680 504 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 UBE3CQ15386 1083 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 SAMD7Q7Z3H4 446 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 SLF2Q8IX21 1173 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 TRPM4Q8TD43 1214 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 ZBED3Q96IU2 234 aaPredicted RBP20.36■□□□□ 0.85
TRIM39-211ENST00000458516 HACL1Q9UJ83 578 aa20.36■□□□□ 0.85
TRIM39-211ENST00000458516 LDHCP07864 332 aa20.35■□□□□ 0.85
TRIM39-211ENST00000458516 ZFYP08048 801 aaPredicted RBP20.35■□□□□ 0.85
TRIM39-211ENST00000458516 TICAM2Q86XR7 235 aa20.35■□□□□ 0.85
TRIM39-211ENST00000458516 MTMR14Q8NCE2 650 aa20.35■□□□□ 0.85
TRIM39-211ENST00000458516 ZDHHC15Q96MV8 337 aa20.35■□□□□ 0.85
TRIM39-211ENST00000458516 ADARB2Q9NS39 739 aaKnown RBP20.35■□□□□ 0.85
TRIM39-211ENST00000458516 POLR2AP24928 1970 aaKnown RBP20.35■□□□□ 0.85
TRIM39-211ENST00000458516 IQCA1LA6NCM1 817 aa20.34■□□□□ 0.85
TRIM39-211ENST00000458516 KIF4BQ2VIQ3 1234 aa20.34■□□□□ 0.85
TRIM39-211ENST00000458516 LRRFIP1Q32MZ4 808 aaKnown RBP20.34■□□□□ 0.85
TRIM39-211ENST00000458516 TBC1D10BQ4KMP7 808 aaPredicted RBP20.34■□□□□ 0.85
TRIM39-211ENST00000458516 ZNF526Q8TF50 670 aaPredicted RBP20.34■□□□□ 0.85
TRIM39-211ENST00000458516 GPR75-ASB3A0A0A6YYF3 556 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 SPDYE2BA6NHP3 402 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 SPDYE6P0CI01 402 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 EPHX2P34913 555 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 BTDP43251 543 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.85
TRIM39-211ENST00000458516 DLGAP5Q15398 846 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 ZMYM1Q5SVZ6 1142 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 RBM26Q5T8P6 1007 aaKnown RBP20.33■□□□□ 0.85
TRIM39-211ENST00000458516 APOBEC3HQ6NTF7 200 aaKnown RBP20.33■□□□□ 0.85
TRIM39-211ENST00000458516 APPBP2Q92624 585 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 TAF1DQ9H5J8 278 aaPredicted RBP20.33■□□□□ 0.85
TRIM39-211ENST00000458516 NMRK2Q9NPI5 230 aa20.33■□□□□ 0.85
TRIM39-211ENST00000458516 WNT10BO00744 389 aa20.32■□□□□ 0.84
TRIM39-211ENST00000458516 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
TRIM39-211ENST00000458516 MIGA1Q8NAN2 632 aa20.32■□□□□ 0.84
TRIM39-211ENST00000458516 OSBP2Q969R2 916 aa20.32■□□□□ 0.84
TRIM39-211ENST00000458516 PRMT6Q96LA8 375 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms