RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PPP1R12BO60237 982 aaPredicted RBP19.73■□□□□ 0.75
CHCHD3-204ENST00000457942 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
CHCHD3-204ENST00000457942 FXR1P51114 621 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHCHD3-204ENST00000457942 LRRC24Q50LG9 513 aa19.73■□□□□ 0.75
CHCHD3-204ENST00000457942 NBPF12Q5TAG4 269 aaPredicted RBP19.73■□□□□ 0.75
CHCHD3-204ENST00000457942 RIPOR2Q9Y4F9 1068 aa19.73■□□□□ 0.75
CHCHD3-204ENST00000457942 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 CAVIN4Q5BKX8 364 aa19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 MTMR14Q8NCE2 650 aa19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 TDRD7Q8NHU6 1098 aaKnown RBP19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 KLHDC4Q8TBB5 520 aa19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 FAM84BQ96KN1 310 aaPredicted RBP19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 USP44Q9H0E7 712 aa19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 ELP3Q9H9T3 547 aa19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 TTF2Q9UNY4 1162 aaKnown RBP19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 FAM205AQ6ZU69 1335 aa19.72■□□□□ 0.75
CHCHD3-204ENST00000457942 SPDYE2BA6NHP3 402 aa19.71■□□□□ 0.75
CHCHD3-204ENST00000457942 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
CHCHD3-204ENST00000457942 SPDYE6P0CI01 402 aa19.71■□□□□ 0.75
CHCHD3-204ENST00000457942 INHBEP58166 350 aa19.71■□□□□ 0.75
CHCHD3-204ENST00000457942 IQSEC3Q9UPP2 1182 aaPredicted RBP19.71■□□□□ 0.75
CHCHD3-204ENST00000457942 ZSWIM8A7E2V4 1837 aa19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 UBTFL1P0CB47 393 aaPredicted RBP19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 MAP3K11Q16584 847 aa19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 ARMC5Q96C12 935 aa19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 PTPN18Q99952 460 aa19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 NOB1Q9ULX3 412 aaKnown RBP19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 COLQQ9Y215 455 aaPredicted RBP19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 PPP2R3BQ9Y5P8 575 aa19.7■□□□□ 0.74
CHCHD3-204ENST00000457942 MYH13Q9UKX3 1938 aa19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 PDE8BO95263 885 aa19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 IREB2P48200 963 aaKnown RBP19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 SP3Q02447 781 aa19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 PRMT6Q96LA8 375 aaPredicted RBP19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 API5Q9BZZ5 524 aaKnown RBP19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 PTCH2Q9Y6C5 1203 aa19.69■□□□□ 0.74
CHCHD3-204ENST00000457942 ECM2O94769 699 aaPredicted RBP19.68■□□□□ 0.74
CHCHD3-204ENST00000457942 OTUD7BQ6GQQ9 843 aa19.68■□□□□ 0.74
CHCHD3-204ENST00000457942 CDAN1Q8IWY9 1227 aa19.68■□□□□ 0.74
CHCHD3-204ENST00000457942 TRMT2AQ8IZ69 625 aaKnown RBP19.68■□□□□ 0.74
CHCHD3-204ENST00000457942 OPTNQ96CV9 577 aa19.68■□□□□ 0.74
CHCHD3-204ENST00000457942 TMEM106CQ9BVX2 250 aa19.68■□□□□ 0.74
CHCHD3-204ENST00000457942 KIAA0100Q14667 2235 aaKnown RBP19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 USP2O75604 605 aaPredicted RBP19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 IFIT1P09914 478 aaKnown RBP19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 TNFAIP1Q13829 316 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 RASA3Q14644 834 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 PUM3Q15397 648 aaKnown RBP19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 SLC4A8Q2Y0W8 1093 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 SUPT20HL1Q3ZLR7 823 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 SLC9C1Q4G0N8 1177 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 ZNF333Q96JL9 665 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 SERPINA10Q9UK55 444 aa19.67■□□□□ 0.74
CHCHD3-204ENST00000457942 FBXO33Q7Z6M2 555 aa19.66■□□□□ 0.74
CHCHD3-204ENST00000457942 ANKRD13AQ8IZ07 590 aa19.66■□□□□ 0.74
CHCHD3-204ENST00000457942 VGLL2Q8N8G2 317 aa19.66■□□□□ 0.74
CHCHD3-204ENST00000457942 TBC1D22AQ8WUA7 517 aa19.66■□□□□ 0.74
CHCHD3-204ENST00000457942 SIL1Q9H173 461 aa19.66■□□□□ 0.74
CHCHD3-204ENST00000457942 EYA2O00167 538 aa19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 SLC5A1P13866 664 aa19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 CRKP46108 304 aa19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 BCAMP50895 628 aa19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 TAF1CQ15572 869 aaPredicted RBP19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 TDRD3Q9H7E2 651 aaKnown RBP19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 HDAC5Q9UQL6 1122 aa19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 KIF16BQ96L93 1317 aa19.65■□□□□ 0.74
CHCHD3-204ENST00000457942 SPDYE2Q495Y8 402 aa19.64■□□□□ 0.73
CHCHD3-204ENST00000457942 DZIP1LQ8IYY4 767 aaKnown RBP19.64■□□□□ 0.73
CHCHD3-204ENST00000457942 SH3TC2Q8TF17 1288 aa19.64■□□□□ 0.73
CHCHD3-204ENST00000457942 BRI3BPQ8WY22 251 aa19.64■□□□□ 0.73
CHCHD3-204ENST00000457942 ZNF70Q9UC06 446 aaPredicted RBP19.64■□□□□ 0.73
CHCHD3-204ENST00000457942 CCL15-CCL14A0A0B4J2E2 113 aa19.63■□□□□ 0.73
CHCHD3-204ENST00000457942 RFX5P48382 616 aaPredicted RBP19.63■□□□□ 0.73
CHCHD3-204ENST00000457942 CCL15Q16663 113 aa19.63■□□□□ 0.73
CHCHD3-204ENST00000457942 LRRFIP2Q9Y608 721 aaKnown RBP19.63■□□□□ 0.73
CHCHD3-204ENST00000457942 SZT2Q5T011 3432 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 TCP10L2B9ZVM9 353 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 H0YGN5 161 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 TNNI2P48788 182 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 RARSP54136 660 aaKnown RBP19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 LPIN2Q92539 896 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 TEKT1Q969V4 418 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 OTUD5Q96G74 571 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 ARHGAP39Q9C0H5 1083 aa19.62■□□□□ 0.73
CHCHD3-204ENST00000457942 MAST3O60307 1309 aa19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 TESPA1A2RU30 521 aaPredicted RBP19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 VGLL4Q14135 290 aa19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 GRIK5Q16478 980 aa19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 MS4A4AQ96JQ5 239 aa19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 TMOD2Q9NZR1 351 aa19.61■□□□□ 0.73
CHCHD3-204ENST00000457942 FGFR2P21802 821 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 ATP2B3Q16720 1220 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 CHRDL2Q6WN34 429 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 NBPF11Q86T75 865 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 MEIS3Q99687 375 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 TMEM39BQ9GZU3 492 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
CHCHD3-204ENST00000457942 CEP126Q9P2H0 1117 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms