RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 DRC1Q96MC2 740 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 CPA1P15085 419 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 MARCKSP29966 332 aaPredicted RBP11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 EIF6P56537 245 aaKnown RBP11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 KARSQ15046 597 aaKnown RBP11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 PLBD2Q8NHP8 589 aa11.15□□□□□ -0.62
MSC-AS1-201ENST00000457356 BCORL1Q5H9F3 1711 aa11.15□□□□□ -0.63
MSC-AS1-201ENST00000457356 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 SYKP43405 635 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 MICU3Q86XE3 530 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 WASF1Q92558 559 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 CTAGE15A4D2H0 777 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZNF213O14771 459 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 MMP10P09238 476 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 RHOXF2BP0C7M4 288 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 CTAGE8P0CG41 777 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 CTAGE6Q86UF2 777 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 CTAGE4Q8IX94 777 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 RHOXF2Q9BQY4 288 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 TMCO5BA8MYB1 307 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 GBP2P32456 591 aaPredicted RBP11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 UBE4AQ14139 1066 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZRSR2Q15696 482 aaKnown RBP11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 DPP8Q6V1X1 898 aaPredicted RBP11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 RHPN1Q8TCX5 695 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 PPP1R9BQ96SB3 815 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 RASSF4Q9H2L5 321 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 LZTFL1Q9NQ48 299 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 GSTTP1A0A1W2PQM5 241 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZEB2O60315 1214 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 IVLP07476 585 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 TERF1P54274 439 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 IFNKQ9P0W0 207 aa11.14□□□□□ -0.63
MSC-AS1-201ENST00000457356 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 EBAG9O00559 213 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 ALDH1B1P30837 517 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 EVI5LQ96CN4 794 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 KDM5AP29375 1690 aaKnown RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 BLMP54132 1417 aaPredicted RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 GOLIM4O00461 696 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 MTIF2P46199 727 aaKnown RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 PRPF4BQ13523 1007 aaKnown RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 NEXMIFQ5QGS0 1516 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 AKR1B10O60218 316 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 LDHCP07864 332 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 IDEP14735 1019 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 NF2P35240 595 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 NOP2P46087 812 aaKnown RBP11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 MAP3K12Q12852 859 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
MSC-AS1-201ENST00000457356 SPATA31A5Q5VU36 1347 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 SPATA31A7Q8IWB4 1347 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 DCCP43146 1447 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 IFIT3O14879 490 aaKnown RBP11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 UFL1O94874 794 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 IARSP41252 1262 aaKnown RBP11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 AFMP43652 599 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 AK2P54819 239 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 KRBA2Q6ZNG9 492 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 NAPBQ9H115 298 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZSCAN16Q9H4T2 348 aaPredicted RBP11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 VEZTQ9HBM0 779 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 CHL1O00533 1208 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 CNKSR1Q969H4 720 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 USP26Q9BXU7 913 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 RABEP2Q9H5N1 569 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZBTB40Q9NUA8 1239 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 MACROD2A1Z1Q3 448 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 MPHOSPH10O00566 681 aaKnown RBP11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 SERPINB2P05120 415 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 OVOS2A0A0J9YW53 1432 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 MST1RQ04912 1400 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 OVOS2Q6IE36 1432 aa11.12□□□□□ -0.63
MSC-AS1-201ENST00000457356 HOXB7P09629 217 aa11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 WDR78Q5VTH9 848 aa11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 PLEKHM2Q8IWE5 1019 aa11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 CPSF1Q10570 1443 aaKnown RBP11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 ZNF500O60304 480 aaPredicted RBP11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 ELF2Q15723 593 aa11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
MSC-AS1-201ENST00000457356 VAMP4O75379 141 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms