RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SLC26A8Q96RN1 970 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 PSD3Q9NYI0 1048 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 CBFA2T2O43439 604 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 CMA1P23946 247 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 CDC27P30260 824 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 TTLL5Q6EMB2 1281 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 ZNF274Q96GC6 653 aaPredicted RBP11.87□□□□□ -0.51
CLIP4-208ENST00000456385 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 A0A0U1RQJ8 604 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 SYKP43405 635 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 PDE4BQ07343 736 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 MTF1Q14872 753 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 FCHSD1Q86WN1 690 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
CLIP4-208ENST00000456385 ATRIPQ8WXE1 791 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 PUF60Q9UHX1 559 aaKnown RBP11.87□□□□□ -0.51
CLIP4-208ENST00000456385 TUBE1Q9UJT0 475 aa11.87□□□□□ -0.51
CLIP4-208ENST00000456385 CCDC151A5D8V7 595 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 ANKRD65E5RJM6 399 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 ABTB2Q8N961 1025 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 TC2NQ8N9U0 490 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 PNKPQ96T60 521 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 HAUS7Q99871 368 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 ANKZF1Q9H8Y5 726 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 MRPL44Q9H9J2 332 aaKnown RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 GOLIM4O00461 696 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 BMP6P22004 513 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-208ENST00000456385 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 C14orf37Q86TY3 774 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 KBTBD3Q8NAB2 608 aa11.86□□□□□ -0.51
CLIP4-208ENST00000456385 ADAMTS13Q76LX8 1427 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 TBX2Q13207 712 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-208ENST00000456385 SHC4Q6S5L8 630 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 LEKR1Q6ZMV7 388 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 IQUBQ8NA54 791 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 CLIC6Q96NY7 704 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 LZTFL1Q9NQ48 299 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 LAMA4Q16363 1823 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 MED1Q15648 1581 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-208ENST00000456385 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 NEURL1BA8MQ27 555 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 FOXN1O15353 648 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 STX10O60499 249 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 PHACTR2O75167 634 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 MYL6BP14649 208 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 LTKP29376 864 aa11.85□□□□□ -0.51
CLIP4-208ENST00000456385 METTL16Q86W50 562 aaKnown RBP11.85□□□□□ -0.51
CLIP4-208ENST00000456385 LRRC59Q96AG4 307 aaKnown RBP11.85□□□□□ -0.51
CLIP4-208ENST00000456385 SH3TC1Q8TE82 1336 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 RFX5P48382 616 aaPredicted RBP11.84□□□□□ -0.51
CLIP4-208ENST00000456385 HAND2P61296 217 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
CLIP4-208ENST00000456385 GCKRQ14397 625 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 BRD3Q15059 726 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 PDIA6Q15084 440 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 AIFM3Q96NN9 605 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 DSCC1Q9BVC3 393 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 PLEKHA4Q9H4M7 779 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 MRC1P22897 1456 aa11.84□□□□□ -0.51
CLIP4-208ENST00000456385 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 SOWAHDA6NJG2 315 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 CUTAO60888 179 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.51
CLIP4-208ENST00000456385 SLC39A14Q15043 492 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 BRAPQ7Z569 592 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 MYD88Q99836 296 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 ABCB6Q9NP58 842 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 HPSEQ9Y251 543 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 PCDHA5Q9Y5H7 936 aa11.83□□□□□ -0.51
CLIP4-208ENST00000456385 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
CLIP4-208ENST00000456385 GTF2A1P52655 376 aaPredicted RBP11.83□□□□□ -0.52
CLIP4-208ENST00000456385 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 SPECC1LQ69YQ0 1117 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 OLFM4Q6UX06 510 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 SRGAP1Q7Z6B7 1085 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 C19orf44Q9H6X5 657 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 L1RE1Q9UN81 338 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 TMEM2Q9UHN6 1383 aa11.83□□□□□ -0.52
CLIP4-208ENST00000456385 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms