RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 PPP1R12BO60237 982 aaPredicted RBP16.18■□□□□ 0.18
TREX1-203ENST00000456089 USP2O75604 605 aaPredicted RBP16.18■□□□□ 0.18
TREX1-203ENST00000456089 GJA5P36382 358 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 RFX5P48382 616 aaPredicted RBP16.18■□□□□ 0.18
TREX1-203ENST00000456089 RGS19P49795 217 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 CACNB3P54284 484 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 MAP3K11Q16584 847 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
TREX1-203ENST00000456089 TMEM39BQ9GZU3 492 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 SERPINA10Q9UK55 444 aa16.18■□□□□ 0.18
TREX1-203ENST00000456089 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
TREX1-203ENST00000456089 SUPT20HL1Q3ZLR7 823 aa16.17■□□□□ 0.18
TREX1-203ENST00000456089 CAVIN4Q5BKX8 364 aa16.17■□□□□ 0.18
TREX1-203ENST00000456089 SIL1Q9H173 461 aa16.17■□□□□ 0.18
TREX1-203ENST00000456089 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
TREX1-203ENST00000456089 TEPSINQ96N21 525 aa16.16■□□□□ 0.18
TREX1-203ENST00000456089 ELP3Q9H9T3 547 aa16.16■□□□□ 0.18
TREX1-203ENST00000456089 KIF16BQ96L93 1317 aa16.16■□□□□ 0.18
TREX1-203ENST00000456089 EYA2O00167 538 aa16.15■□□□□ 0.18
TREX1-203ENST00000456089 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
TREX1-203ENST00000456089 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
TREX1-203ENST00000456089 FGFR2P21802 821 aa16.15■□□□□ 0.18
TREX1-203ENST00000456089 IREB2P48200 963 aaKnown RBP16.15■□□□□ 0.18
TREX1-203ENST00000456089 PUM3Q15397 648 aaKnown RBP16.15■□□□□ 0.18
TREX1-203ENST00000456089 ATG9AQ7Z3C6 839 aa16.15■□□□□ 0.18
TREX1-203ENST00000456089 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
TREX1-203ENST00000456089 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
TREX1-203ENST00000456089 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
TREX1-203ENST00000456089 MANSC4A6NHS7 340 aaPredicted RBP16.14■□□□□ 0.17
TREX1-203ENST00000456089 UBTFL1P0CB47 393 aaPredicted RBP16.14■□□□□ 0.17
TREX1-203ENST00000456089 TNFAIP1Q13829 316 aa16.14■□□□□ 0.17
TREX1-203ENST00000456089 PA2G4Q9UQ80 394 aaKnown RBP16.14■□□□□ 0.17
TREX1-203ENST00000456089 LRRFIP2Q9Y608 721 aaKnown RBP16.14■□□□□ 0.17
TREX1-203ENST00000456089 MYH2Q9UKX2 1941 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 FKTNO75072 461 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 IFIT1P09914 478 aaKnown RBP16.13■□□□□ 0.17
TREX1-203ENST00000456089 ZBTB48P10074 688 aaPredicted RBP16.13■□□□□ 0.17
TREX1-203ENST00000456089 SLC5A1P13866 664 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 FRAT1Q92837 279 aaPredicted RBP16.13■□□□□ 0.17
TREX1-203ENST00000456089 TEKT1Q969V4 418 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
TREX1-203ENST00000456089 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
TREX1-203ENST00000456089 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
TREX1-203ENST00000456089 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
TREX1-203ENST00000456089 OPTNQ96CV9 577 aa16.12■□□□□ 0.17
TREX1-203ENST00000456089 MEIS3Q99687 375 aa16.12■□□□□ 0.17
TREX1-203ENST00000456089 TNNI2P48788 182 aa16.11■□□□□ 0.17
TREX1-203ENST00000456089 VGLL4Q14135 290 aa16.11■□□□□ 0.17
TREX1-203ENST00000456089 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
TREX1-203ENST00000456089 LPIN2Q92539 896 aa16.11■□□□□ 0.17
TREX1-203ENST00000456089 PTPN18Q99952 460 aa16.11■□□□□ 0.17
TREX1-203ENST00000456089 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
TREX1-203ENST00000456089 CRHR2Q13324 411 aa16.1■□□□□ 0.17
TREX1-203ENST00000456089 DIXDC1Q155Q3 683 aa16.1■□□□□ 0.17
TREX1-203ENST00000456089 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
TREX1-203ENST00000456089 ZDHHC15Q96MV8 337 aa16.1■□□□□ 0.17
TREX1-203ENST00000456089 CFHR5Q9BXR6 569 aa16.1■□□□□ 0.17
TREX1-203ENST00000456089 ALDH1A1P00352 501 aa16.09■□□□□ 0.17
TREX1-203ENST00000456089 ADORA1P30542 326 aa16.09■□□□□ 0.17
TREX1-203ENST00000456089 INHBEP58166 350 aa16.09■□□□□ 0.17
TREX1-203ENST00000456089 HDLBPQ00341 1268 aaKnown RBP16.09■□□□□ 0.17
TREX1-203ENST00000456089 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
TREX1-203ENST00000456089 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
TREX1-203ENST00000456089 UNCXA6NJT0 531 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 BCAR3O75815 825 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 PRDX5P30044 214 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 PHKA1P46020 1223 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 MAP3K9P80192 1104 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 CAP1Q01518 475 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
TREX1-203ENST00000456089 FBXO46Q6PJ61 603 aaPredicted RBP16.08■□□□□ 0.16
TREX1-203ENST00000456089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.16
TREX1-203ENST00000456089 CD99L2Q8TCZ2 262 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 ZKSCAN4Q969J2 545 aaPredicted RBP16.08■□□□□ 0.16
TREX1-203ENST00000456089 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 CEP126Q9P2H0 1117 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 TRIM17Q9Y577 477 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 HTTP42858 3142 aa16.08■□□□□ 0.16
TREX1-203ENST00000456089 CIAO1O76071 339 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 TCP10Q12799 353 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 MIGA2Q7L4E1 593 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 WDR66Q8TBY9 1149 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 BRI3BPQ8WY22 251 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 DAGLAQ9Y4D2 1042 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 MAST3O60307 1309 aa16.07■□□□□ 0.16
TREX1-203ENST00000456089 CENPFP49454 3210 aa16.06■□□□□ 0.16
TREX1-203ENST00000456089 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
TREX1-203ENST00000456089 TESPA1A2RU30 521 aaPredicted RBP16.06■□□□□ 0.16
TREX1-203ENST00000456089 CCL15Q16663 113 aa16.06■□□□□ 0.16
TREX1-203ENST00000456089 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
TREX1-203ENST00000456089 HHIPL2Q6UWX4 724 aa16.06■□□□□ 0.16
TREX1-203ENST00000456089 OTOP1Q7RTM1 612 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms