RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 CLIC4Q9Y696 253 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 URI1O94763 535 aaPredicted RBP12.92□□□□□ -0.34
DDR1-240ENST00000454612 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 HLFQ16534 295 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 MRPS27Q92552 414 aaKnown RBP12.92□□□□□ -0.34
DDR1-240ENST00000454612 NACAP1Q9BZK3 213 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 NFAT5O94916 1531 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 AOX1Q06278 1338 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 G3V3G9 751 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 ZBTB43O43298 467 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 CYP7A1P22680 504 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 SYKP43405 635 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 PHKA1P46020 1223 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 UVSSAQ2YD98 709 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 C11orf57Q6ZUT1 292 aaPredicted RBP12.92□□□□□ -0.34
DDR1-240ENST00000454612 STOX1Q6ZVD7 989 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDR1-240ENST00000454612 STX1AQ16623 288 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 PGBD1Q96JS3 809 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 ERCC3P19447 782 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 GTPBP4Q9BZE4 634 aaKnown RBP12.91□□□□□ -0.34
DDR1-240ENST00000454612 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
DDR1-240ENST00000454612 COPRSQ9NQ92 184 aa12.91□□□□□ -0.34
DDR1-240ENST00000454612 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
DDR1-240ENST00000454612 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
DDR1-240ENST00000454612 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
DDR1-240ENST00000454612 PRKAB2O43741 272 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 HS1BP3Q53T59 392 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
DDR1-240ENST00000454612 ZBTB1Q9Y2K1 713 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 FAM208AQ9UK61 1670 aaKnown RBP12.9□□□□□ -0.34
DDR1-240ENST00000454612 MAST3O60307 1309 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
DDR1-240ENST00000454612 HAUS7Q99871 368 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 KIF20AO95235 890 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
DDR1-240ENST00000454612 BCAMP50895 628 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 PDIA6Q15084 440 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
DDR1-240ENST00000454612 SLIT3O75094 1523 aa12.9□□□□□ -0.35
DDR1-240ENST00000454612 FAM170AA1A519 330 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 PDLIM2Q96JY6 352 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 LRRC37A3O60309 1634 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 HSPA1LP34931 641 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 SSRP1Q08945 709 aaKnown RBP12.89□□□□□ -0.35
DDR1-240ENST00000454612 TEX35Q5T0J7 233 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
DDR1-240ENST00000454612 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 TFCP2L1Q9NZI6 479 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
DDR1-240ENST00000454612 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 NDUFA8P51970 172 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 CEP135Q66GS9 1140 aa12.89□□□□□ -0.35
DDR1-240ENST00000454612 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
DDR1-240ENST00000454612 DMTNQ08495 405 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 GPATCH11Q8N954 259 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 NSUN7Q8NE18 718 aaKnown RBP12.88□□□□□ -0.35
DDR1-240ENST00000454612 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 SLC5A1P13866 664 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 ZNF75DP51815 510 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 CYP2D7A0A087X1C5 515 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
DDR1-240ENST00000454612 CLSTN1O94985 981 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 DHX58Q96C10 678 aa12.88□□□□□ -0.35
DDR1-240ENST00000454612 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
DDR1-240ENST00000454612 CPDO75976 1380 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 UBASH3AP57075 661 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 TCIRG1Q13488 830 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 SYT10Q6XYQ8 523 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 CACTINQ8WUQ7 758 aaKnown RBP12.87□□□□□ -0.35
DDR1-240ENST00000454612 TIGD1Q96MW7 591 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
DDR1-240ENST00000454612 AP5Z1O43299 807 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 PNOCQ13519 176 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
DDR1-240ENST00000454612 PXDNLA1KZ92 1463 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 TPM3P06753 285 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
DDR1-240ENST00000454612 USP5P45974 858 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 GYG1P46976 350 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 WTAPQ15007 396 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
DDR1-240ENST00000454612 DNA2P51530 1060 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms