RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 RASA3Q14644 834 aa20.48■□□□□ 0.87
NCKIPSD-208ENST00000454134 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
NCKIPSD-208ENST00000454134 COPRSQ9NQ92 184 aa20.48■□□□□ 0.87
NCKIPSD-208ENST00000454134 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.48■□□□□ 0.87
NCKIPSD-208ENST00000454134 PPP2R3BQ9Y5P8 575 aa20.48■□□□□ 0.87
NCKIPSD-208ENST00000454134 SRGAP3O43295 1099 aa20.47■□□□□ 0.87
NCKIPSD-208ENST00000454134 TRPA1O75762 1119 aa20.47■□□□□ 0.87
NCKIPSD-208ENST00000454134 IL15P40933 162 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-208ENST00000454134 NBPF12Q5TAG4 269 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-208ENST00000454134 RNF186Q9NXI6 227 aa20.47■□□□□ 0.87
NCKIPSD-208ENST00000454134 LDLRAD1Q5T700 205 aa20.46■□□□□ 0.87
NCKIPSD-208ENST00000454134 ZKSCAN2Q63HK3 967 aa20.46■□□□□ 0.87
NCKIPSD-208ENST00000454134 TMEM57Q8N5G2 664 aa20.46■□□□□ 0.87
NCKIPSD-208ENST00000454134 CASP8AP2Q9UKL3 1982 aa20.46■□□□□ 0.87
NCKIPSD-208ENST00000454134 TCP10L2B9ZVM9 353 aa20.45■□□□□ 0.86
NCKIPSD-208ENST00000454134 TEKT1Q969V4 418 aa20.45■□□□□ 0.86
NCKIPSD-208ENST00000454134 GNAI2P04899 355 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 ADORA1P30542 326 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 PHKA1P46020 1223 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 HDLBPQ00341 1268 aaKnown RBP20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 MTX1Q13505 466 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 SUPT20HL1Q3ZLR7 823 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 CDAN1Q8IWY9 1227 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 SAGE1Q9NXZ1 904 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 AKAP11Q9UKA4 1901 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 ZBED9Q6R2W3 1325 aa20.44■□□□□ 0.86
NCKIPSD-208ENST00000454134 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
NCKIPSD-208ENST00000454134 CACNB3P54284 484 aa20.43■□□□□ 0.86
NCKIPSD-208ENST00000454134 TNFAIP1Q13829 316 aa20.43■□□□□ 0.86
NCKIPSD-208ENST00000454134 WDR66Q8TBY9 1149 aa20.43■□□□□ 0.86
NCKIPSD-208ENST00000454134 CLMNQ96JQ2 1002 aa20.43■□□□□ 0.86
NCKIPSD-208ENST00000454134 TIMM10P62072 90 aa20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 TFCP2Q12800 502 aa20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 REM2Q8IYK8 340 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 ABHD8Q96I13 439 aa20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 ZDHHC15Q96MV8 337 aa20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 TMEM39BQ9GZU3 492 aa20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 SUGT1Q9Y2Z0 365 aa20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-208ENST00000454134 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 USP2O75604 605 aaPredicted RBP20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 MAP3K11Q16584 847 aa20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 SPRYD7Q5W111 196 aa20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 TEPSINQ96N21 525 aa20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 GNL3LQ9NVN8 582 aaKnown RBP20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 MAST3O60307 1309 aa20.41■□□□□ 0.86
NCKIPSD-208ENST00000454134 CCDC102BQ68D86 513 aa20.4■□□□□ 0.86
NCKIPSD-208ENST00000454134 APOBEC3HQ6NTF7 200 aaKnown RBP20.4■□□□□ 0.86
NCKIPSD-208ENST00000454134 MRIQ9BWK5 157 aa20.4■□□□□ 0.86
NCKIPSD-208ENST00000454134 A0A1B0GUL7 405 aa20.39■□□□□ 0.85
NCKIPSD-208ENST00000454134 RLBP1P12271 317 aa20.39■□□□□ 0.85
NCKIPSD-208ENST00000454134 PRDX5P30044 214 aa20.39■□□□□ 0.85
NCKIPSD-208ENST00000454134 TNNI2P48788 182 aa20.39■□□□□ 0.85
NCKIPSD-208ENST00000454134 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
NCKIPSD-208ENST00000454134 IREB2P48200 963 aaKnown RBP20.38■□□□□ 0.85
NCKIPSD-208ENST00000454134 TM4SF4P48230 202 aa20.38■□□□□ 0.85
NCKIPSD-208ENST00000454134 DIXDC1Q155Q3 683 aa20.38■□□□□ 0.85
NCKIPSD-208ENST00000454134 HHIPL2Q6UWX4 724 aa20.38■□□□□ 0.85
NCKIPSD-208ENST00000454134 C1orf115Q9H7X2 142 aa20.38■□□□□ 0.85
NCKIPSD-208ENST00000454134 DENND2AQ9ULE3 1009 aa20.38■□□□□ 0.85
NCKIPSD-208ENST00000454134 SEMA3EO15041 775 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 TBC1D8O95759 1140 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 LDHBP07195 334 aaKnown RBP20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 DGKZQ13574 1117 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 ITPRIPQ8IWB1 547 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 XAGE2Q96GT9 111 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 WNK4Q96J92 1243 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 MCOLN1Q9GZU1 580 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 TMOD2Q9NZR1 351 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 AKAP2Q9Y2D5 859 aa20.37■□□□□ 0.85
NCKIPSD-208ENST00000454134 SREBF2Q12772 1141 aa20.36■□□□□ 0.85
NCKIPSD-208ENST00000454134 RASGRF1Q13972 1273 aa20.36■□□□□ 0.85
NCKIPSD-208ENST00000454134 ANKRD13AQ8IZ07 590 aa20.36■□□□□ 0.85
NCKIPSD-208ENST00000454134 NEUROD6Q96NK8 337 aa20.36■□□□□ 0.85
NCKIPSD-208ENST00000454134 DAGLAQ9Y4D2 1042 aa20.36■□□□□ 0.85
NCKIPSD-208ENST00000454134 SALL1Q9NSC2 1324 aa20.35■□□□□ 0.85
NCKIPSD-208ENST00000454134 GJA5P36382 358 aa20.35■□□□□ 0.85
NCKIPSD-208ENST00000454134 G3BP1Q13283 466 aaKnown RBP eCLIP20.35■□□□□ 0.85
NCKIPSD-208ENST00000454134 OTOFQ9HC10 1997 aa20.35■□□□□ 0.85
NCKIPSD-208ENST00000454134 MVPQ14764 893 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-208ENST00000454134 ELP3Q9H9T3 547 aa20.34■□□□□ 0.85
NCKIPSD-208ENST00000454134 MANSC4A6NHS7 340 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 UNCXA6NJT0 531 aa20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 ZBTB7BO15156 539 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 POLA2Q14181 598 aa20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 FKBP1CQ5VVH2 108 aa20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 CDC42EP5Q6NZY7 148 aa20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 FAM83AQ86UY5 434 aa20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 ABCF2Q9UG63 623 aa20.33■□□□□ 0.85
NCKIPSD-208ENST00000454134 CCDC85CA6NKD9 419 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 ATP8B2P98198 1209 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 TCP10Q12799 353 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 GORABQ5T7V8 394 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 PANK1Q8TE04 598 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
NCKIPSD-208ENST00000454134 OPTNQ96CV9 577 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms