RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
DDR1-239ENST00000452441 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 MRVI1Q9Y6F6 885 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 M0R2C6 588 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 SCARF1Q14162 830 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 C11orf57Q6ZUT1 292 aaPredicted RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 NCOA7Q8NI08 942 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 PUS7LQ9H0K6 701 aaKnown RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 SLC12A7Q9Y666 1083 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 IARSP41252 1262 aaKnown RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 CLIC6Q96NY7 704 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 NOL10Q9BSC4 688 aaKnown RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 CLIC4Q9Y696 253 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 STOX1Q6ZVD7 989 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 EEF2KMTQ96G04 330 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 UIMC1Q96RL1 719 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 ANO10Q9NW15 660 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDR1-239ENST00000452441 HEG1Q9ULI3 1381 aa12.93□□□□□ -0.34
DDR1-239ENST00000452441 N4BP2Q86UW6 1770 aaPredicted RBP12.93□□□□□ -0.34
DDR1-239ENST00000452441 CYP7A1P22680 504 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 CNNM3Q8NE01 707 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 GNPATO15228 680 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 TPM3P06753 285 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 PCMTD1Q96MG8 357 aaPredicted RBP12.92□□□□□ -0.34
DDR1-239ENST00000452441 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
DDR1-239ENST00000452441 SLC4A4Q9Y6R1 1079 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 SPTLC2O15270 562 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 URI1O94763 535 aaPredicted RBP12.92□□□□□ -0.34
DDR1-239ENST00000452441 CLSTN1O94985 981 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 MBD4O95243 580 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
DDR1-239ENST00000452441 SFPQP23246 707 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDR1-239ENST00000452441 PHKA1P46020 1223 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 SPTLC3Q9NUV7 552 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
DDR1-239ENST00000452441 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
DDR1-239ENST00000452441 PLIN2Q99541 437 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
DDR1-239ENST00000452441 KCNQ2O43526 872 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDR1-239ENST00000452441 STX1AQ16623 288 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 HAUS7Q99871 368 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 ERCC3P19447 782 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 MTX1Q13505 466 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 CAVIN4Q5BKX8 364 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
DDR1-239ENST00000452441 ZNF652Q9Y2D9 606 aa12.91□□□□□ -0.34
DDR1-239ENST00000452441 UBE2Q2LH0YL09 131 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 SYKP43405 635 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
DDR1-239ENST00000452441 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 CEP135Q66GS9 1140 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
DDR1-239ENST00000452441 TRIM22Q8IYM9 498 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 MAST3O60307 1309 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 ZBTB43O43298 467 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
DDR1-239ENST00000452441 BCAMP50895 628 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 NDUFA8P51970 172 aa12.9□□□□□ -0.34
DDR1-239ENST00000452441 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
DDR1-239ENST00000452441 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.35
DDR1-239ENST00000452441 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
DDR1-239ENST00000452441 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 FAM170AA1A519 330 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 IKQ13123 557 aaPredicted RBP12.89□□□□□ -0.35
DDR1-239ENST00000452441 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 SDR42E1Q8WUS8 393 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 PRKAB2O43741 272 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 RFC4P35249 363 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 GYG1P46976 350 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 ZNF75DP51815 510 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
DDR1-239ENST00000452441 PCDHA7Q9UN72 937 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
DDR1-239ENST00000452441 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 TRMT1LQ7Z2T5 733 aaKnown RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 SMAP1Q8IYB5 467 aaPredicted RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 CTSWP56202 376 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
DDR1-239ENST00000452441 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
DDR1-239ENST00000452441 H7C1W4 665 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms