RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 H7C1D1 291 aa14.46□□□□□ -0.1
LINC00339-205ENST00000452322 GOLIM4O00461 696 aa14.46□□□□□ -0.1
LINC00339-205ENST00000452322 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.1
LINC00339-205ENST00000452322 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.1
LINC00339-205ENST00000452322 PIH1D3Q9NQM4 214 aaKnown RBP14.46□□□□□ -0.1
LINC00339-205ENST00000452322 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.1
LINC00339-205ENST00000452322 SHTN1A0MZ66 631 aa14.45□□□□□ -0.1
LINC00339-205ENST00000452322 VEGFAP15692 232 aaPredicted RBP14.45□□□□□ -0.1
LINC00339-205ENST00000452322 EPS15P42566 896 aa14.45□□□□□ -0.1
LINC00339-205ENST00000452322 HDLBPQ00341 1268 aaKnown RBP14.45□□□□□ -0.1
LINC00339-205ENST00000452322 DZIP1Q86YF9 867 aaKnown RBP14.45□□□□□ -0.1
LINC00339-205ENST00000452322 EDC3Q96F86 508 aaKnown RBP14.45□□□□□ -0.1
LINC00339-205ENST00000452322 MRIQ9BWK5 157 aa14.45□□□□□ -0.1
LINC00339-205ENST00000452322 ADARB2Q9NS39 739 aaKnown RBP14.45□□□□□ -0.1
LINC00339-205ENST00000452322 SERPINA10Q9UK55 444 aa14.45□□□□□ -0.1
LINC00339-205ENST00000452322 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
LINC00339-205ENST00000452322 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
LINC00339-205ENST00000452322 TMED8Q6PL24 325 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-205ENST00000452322 NSUN4Q96CB9 384 aaKnown RBP14.44□□□□□ -0.1
LINC00339-205ENST00000452322 TAF1DQ9H5J8 278 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-205ENST00000452322 RRAGCQ9HB90 399 aa14.44□□□□□ -0.1
LINC00339-205ENST00000452322 GPBP1L1Q9HC44 474 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-205ENST00000452322 MYOZ2Q9NPC6 264 aa14.44□□□□□ -0.1
LINC00339-205ENST00000452322 NMRK2Q9NPI5 230 aa14.44□□□□□ -0.1
LINC00339-205ENST00000452322 RAI14Q9P0K7 980 aa14.44□□□□□ -0.1
LINC00339-205ENST00000452322 MYO5AQ9Y4I1 1855 aaKnown RBP14.43□□□□□ -0.1
LINC00339-205ENST00000452322 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
LINC00339-205ENST00000452322 EPHX2P34913 555 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 CRKP46108 304 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 MECOMQ03112 1051 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 USP50Q70EL3 339 aaPredicted RBP14.43□□□□□ -0.1
LINC00339-205ENST00000452322 SLF2Q8IX21 1173 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 KBTBD3Q8NAB2 608 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 MTMR14Q8NCE2 650 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 TEKT1Q969V4 418 aa14.43□□□□□ -0.1
LINC00339-205ENST00000452322 GAKO14976 1311 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 MAP4K4O95819 1239 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-205ENST00000452322 GSTO1P78417 241 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 CFAP100Q494V2 611 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 TBC1D10BQ4KMP7 808 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-205ENST00000452322 TTC22Q5TAA0 569 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 HHIPL2Q6UWX4 724 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 SAMD7Q7Z3H4 446 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 PNMA8AQ86V59 439 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-205ENST00000452322 ZNF384Q8TF68 577 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 EVI5LQ96CN4 794 aa14.42□□□□□ -0.1
LINC00339-205ENST00000452322 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-205ENST00000452322 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC00339-205ENST00000452322 ADAMTSL1Q8N6G6 1762 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 EGFRP00533 1210 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 LDHCP07864 332 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 DLGAP5Q15398 846 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 DIXDC1Q155Q3 683 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 NAA16Q6N069 864 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-205ENST00000452322 SKAP1Q86WV1 359 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 CNTROBQ8N137 903 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 ZNF784Q8NCA9 323 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-205ENST00000452322 TRPM4Q8TD43 1214 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 ZBED3Q96IU2 234 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-205ENST00000452322 ZDHHC15Q96MV8 337 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 MYH7P12883 1935 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 MYH2Q9UKX2 1941 aa14.41□□□□□ -0.1
LINC00339-205ENST00000452322 MROH7-TTC4A0A0A0MT08 1334 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 WNT10BO00744 389 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 GSPT1P15170 499 aaKnown RBP14.4□□□□□ -0.1
LINC00339-205ENST00000452322 RGS3P49796 1198 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 RBM5P52756 815 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC00339-205ENST00000452322 LRRFIP1Q32MZ4 808 aaKnown RBP14.4□□□□□ -0.1
LINC00339-205ENST00000452322 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
LINC00339-205ENST00000452322 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 DAGLAQ9Y4D2 1042 aa14.4□□□□□ -0.1
LINC00339-205ENST00000452322 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 TRIM6-TRIM34B2RNG4 842 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 PDE6AP16499 860 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 ADD2P35612 726 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 HIRAP54198 1017 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-205ENST00000452322 TICAM2Q86XR7 235 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 FSD1Q9BTV5 496 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 ECM29Q5VYK3 1845 aa14.39□□□□□ -0.11
LINC00339-205ENST00000452322 KIF3CO14782 793 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 ZFYP08048 801 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-205ENST00000452322 CYP7A1P22680 504 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 UBE3CQ15386 1083 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 NBPF9Q3BBW0 867 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-205ENST00000452322 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
LINC00339-205ENST00000452322 ZC3H15Q8WU90 426 aaKnown RBP14.38□□□□□ -0.11
LINC00339-205ENST00000452322 RILPL2Q969X0 211 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 PRMT6Q96LA8 375 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-205ENST00000452322 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 AK9Q5TCS8 1911 aa14.38□□□□□ -0.11
LINC00339-205ENST00000452322 ZNF532Q9HCE3 1301 aa14.37□□□□□ -0.11
LINC00339-205ENST00000452322 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
LINC00339-205ENST00000452322 TCRBV5S4A2TA0A5A2 114 aa14.37□□□□□ -0.11
LINC00339-205ENST00000452322 MYO1BO43795 1136 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms