RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 GGA3Q9NZ52 723 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-203ENST00000452013 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 DBNLQ9UJU6 430 aaKnown RBP10.87□□□□□ -0.67
COL8A1-203ENST00000452013 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 LDHCP07864 332 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 GRIK5Q16478 980 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 APOBEC3FQ8IUX4 373 aaKnown RBP10.86□□□□□ -0.67
COL8A1-203ENST00000452013 EXOC6Q8TAG9 804 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
COL8A1-203ENST00000452013 TRAF5O00463 557 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 GSTO1P78417 241 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 HDAC1Q13547 482 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-203ENST00000452013 DZIP1Q86YF9 867 aaKnown RBP10.85□□□□□ -0.67
COL8A1-203ENST00000452013 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 LRP2BPQ9P2M1 347 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 SCN4AP35499 1836 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
COL8A1-203ENST00000452013 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-203ENST00000452013 ADM5C9JUS6 153 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
COL8A1-203ENST00000452013 PRDX5P30044 214 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 NF2P35240 595 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 MCAMP43121 646 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 TNNI2P48788 182 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 TNFAIP1Q13829 316 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 C2orf69Q8N8R5 385 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-203ENST00000452013 TDRD3Q9H7E2 651 aaKnown RBP10.84□□□□□ -0.67
COL8A1-203ENST00000452013 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 SNRKQ9NRH2 765 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
COL8A1-203ENST00000452013 TMOD2Q9NZR1 351 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
COL8A1-203ENST00000452013 ZNF70Q9UC06 446 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-203ENST00000452013 CLRN2A0PK11 232 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-203ENST00000452013 ZAP70P43403 619 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 FMR1Q06787 632 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL8A1-203ENST00000452013 TTF1Q15361 905 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-203ENST00000452013 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 CST9Q5W186 159 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 APOBEC3HQ6NTF7 200 aaKnown RBP10.83□□□□□ -0.68
COL8A1-203ENST00000452013 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL8A1-203ENST00000452013 CDCA5Q96FF9 252 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 GPATCH3Q96I76 525 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 DEFB129Q9H1M3 183 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 ABT1Q9ULW3 272 aaKnown RBP10.83□□□□□ -0.68
COL8A1-203ENST00000452013 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 PPP2R3BQ9Y5P8 575 aa10.83□□□□□ -0.68
COL8A1-203ENST00000452013 MAP4K4O95819 1239 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-203ENST00000452013 CYP2E1P05181 493 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-203ENST00000452013 ATP5JP18859 108 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 MECOMQ03112 1051 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 DEFB115Q30KQ5 88 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 ANKRD45Q5TZF3 282 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 FKBP1CQ5VVH2 108 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 TMED8Q6PL24 325 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-203ENST00000452013 PI16Q6UXB8 463 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 NOL10Q9BSC4 688 aaKnown RBP10.82□□□□□ -0.68
COL8A1-203ENST00000452013 USP40Q9NVE5 1235 aa10.82□□□□□ -0.68
COL8A1-203ENST00000452013 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 BAG3O95817 575 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 FKBP1BP68106 108 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
COL8A1-203ENST00000452013 HTRA3P83110 453 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 MAP3K12Q12852 859 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 RASA3Q14644 834 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 DIXDC1Q155Q3 683 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 DLK2Q6UY11 383 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 NSUN4Q96CB9 384 aaKnown RBP10.81□□□□□ -0.68
COL8A1-203ENST00000452013 GBA2Q9HCG7 927 aaPredicted RBP10.81□□□□□ -0.68
COL8A1-203ENST00000452013 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 DAGLAQ9Y4D2 1042 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 TLL2Q9Y6L7 1015 aa10.81□□□□□ -0.68
COL8A1-203ENST00000452013 GPR75-ASB3A0A0A6YYF3 556 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 TCP10L2B9ZVM9 353 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 PRAMEF18Q5VWM3 479 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 NAA16Q6N069 864 aaPredicted RBP10.8□□□□□ -0.68
COL8A1-203ENST00000452013 CDC42EP5Q6NZY7 148 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 FAM83AQ86UY5 434 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 DNAJC5GQ8N7S2 189 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 HOOK2Q96ED9 719 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 HHIPL1Q96JK4 782 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 BOLA2Q9H3K6 86 aa10.8□□□□□ -0.68
COL8A1-203ENST00000452013 SCAF8Q9UPN6 1271 aaKnown RBP10.8□□□□□ -0.68
COL8A1-203ENST00000452013 COL1A1P02452 1464 aaPredicted RBP10.8□□□□□ -0.68
COL8A1-203ENST00000452013 RASSF10A6NK89 507 aa10.79□□□□□ -0.68
COL8A1-203ENST00000452013 ERC2O15083 957 aa10.79□□□□□ -0.68
COL8A1-203ENST00000452013 PPP1R12BO60237 982 aaPredicted RBP10.79□□□□□ -0.68
COL8A1-203ENST00000452013 IDH1O75874 414 aaKnown RBP10.79□□□□□ -0.68
COL8A1-203ENST00000452013 IGHDP01880 384 aa10.79□□□□□ -0.68
COL8A1-203ENST00000452013 ECE1P42892 770 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms