RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
LINC01238-204ENST00000451070 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
LINC01238-204ENST00000451070 DZIP1LQ8IYY4 767 aaKnown RBP12.44□□□□□ -0.42
LINC01238-204ENST00000451070 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
LINC01238-204ENST00000451070 TEPSINQ96N21 525 aa12.44□□□□□ -0.42
LINC01238-204ENST00000451070 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
LINC01238-204ENST00000451070 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
LINC01238-204ENST00000451070 MYH13Q9UKX3 1938 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 MANSC4A6NHS7 340 aaPredicted RBP12.43□□□□□ -0.42
LINC01238-204ENST00000451070 UNCXA6NJT0 531 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 ZBTB48P10074 688 aaPredicted RBP12.43□□□□□ -0.42
LINC01238-204ENST00000451070 FGFR2P21802 821 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 CRKP46108 304 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
LINC01238-204ENST00000451070 SOX10P56693 466 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
LINC01238-204ENST00000451070 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
LINC01238-204ENST00000451070 HPS5Q9UPZ3 1129 aa12.43□□□□□ -0.42
LINC01238-204ENST00000451070 IGF2BP3O00425 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC01238-204ENST00000451070 FKTNO75072 461 aa12.42□□□□□ -0.42
LINC01238-204ENST00000451070 IREB2P48200 963 aaKnown RBP12.42□□□□□ -0.42
LINC01238-204ENST00000451070 BCAMP50895 628 aa12.42□□□□□ -0.42
LINC01238-204ENST00000451070 INHBEP58166 350 aa12.42□□□□□ -0.42
LINC01238-204ENST00000451070 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
LINC01238-204ENST00000451070 TNFAIP1Q13829 316 aa12.42□□□□□ -0.42
LINC01238-204ENST00000451070 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
LINC01238-204ENST00000451070 ALDH1L2Q3SY69 923 aa12.42□□□□□ -0.42
LINC01238-204ENST00000451070 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
LINC01238-204ENST00000451070 TCP10L2B9ZVM9 353 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 ALDH1A1P00352 501 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
LINC01238-204ENST00000451070 CAVIN4Q5BKX8 364 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 ANKRD13AQ8IZ07 590 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 TMEM39BQ9GZU3 492 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 HTTP42858 3142 aa12.41□□□□□ -0.42
LINC01238-204ENST00000451070 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
LINC01238-204ENST00000451070 EYA2O00167 538 aa12.4□□□□□ -0.42
LINC01238-204ENST00000451070 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
LINC01238-204ENST00000451070 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
LINC01238-204ENST00000451070 ATG9AQ7Z3C6 839 aa12.4□□□□□ -0.42
LINC01238-204ENST00000451070 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-204ENST00000451070 FRAT2O75474 233 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-204ENST00000451070 CACNB3P54284 484 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
LINC01238-204ENST00000451070 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-204ENST00000451070 TEKT1Q969V4 418 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 MS4A4AQ96JQ5 239 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 PTPN18Q99952 460 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 MRIQ9BWK5 157 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
LINC01238-204ENST00000451070 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
LINC01238-204ENST00000451070 TNNI2P48788 182 aa12.38□□□□□ -0.43
LINC01238-204ENST00000451070 CRHR2Q13324 411 aa12.38□□□□□ -0.43
LINC01238-204ENST00000451070 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01238-204ENST00000451070 OPTNQ96CV9 577 aa12.38□□□□□ -0.43
LINC01238-204ENST00000451070 SUGT1Q9Y2Z0 365 aa12.38□□□□□ -0.43
LINC01238-204ENST00000451070 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
LINC01238-204ENST00000451070 SLC5A1P13866 664 aa12.37□□□□□ -0.43
LINC01238-204ENST00000451070 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
LINC01238-204ENST00000451070 VGLL4Q14135 290 aa12.37□□□□□ -0.43
LINC01238-204ENST00000451070 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
LINC01238-204ENST00000451070 LPIN2Q92539 896 aa12.37□□□□□ -0.43
LINC01238-204ENST00000451070 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
LINC01238-204ENST00000451070 UBTFL1P0CB47 393 aaPredicted RBP12.36□□□□□ -0.43
LINC01238-204ENST00000451070 CAP1Q01518 475 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 FKBP1CQ5VVH2 108 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 SIL1Q9H173 461 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 TRIM17Q9Y577 477 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 CENPFP49454 3210 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 MAST3O60307 1309 aa12.36□□□□□ -0.43
LINC01238-204ENST00000451070 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
LINC01238-204ENST00000451070 CIAO1O76071 339 aa12.35□□□□□ -0.43
LINC01238-204ENST00000451070 OTUD7BQ6GQQ9 843 aa12.35□□□□□ -0.43
LINC01238-204ENST00000451070 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
LINC01238-204ENST00000451070 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
LINC01238-204ENST00000451070 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
LINC01238-204ENST00000451070 SNCAIPQ9Y6H5 919 aa12.35□□□□□ -0.43
LINC01238-204ENST00000451070 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
LINC01238-204ENST00000451070 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 SPDYE5A6NIY4 337 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 SLC34A2O95436 690 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 PRDX5P30044 214 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 GTF2A2P52657 109 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
LINC01238-204ENST00000451070 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 CCL15Q16663 113 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 ATP2B3Q16720 1220 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 CD99L2Q8TCZ2 262 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 MEIS3Q99687 375 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 API5Q9BZZ5 524 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms